Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq306 167 5e-36 seq477 152 1e-31 seq102 138 3e-27 seq1972 113 1e-19 >seq306 Length=72094 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | || || | ||||||||||||||| ||||||||||| || || | ||||| Sbjct 24590 ACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGT 24649 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || |||||||| | || |||||||| || || | ||| Sbjct 24650 GCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCC 24709 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| || || || ||||| ||||| || ||||||||||| Sbjct 24710 CTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACCTCGAG 24769 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| || || | |||||| Sbjct 24770 GGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 152 bits (168), Expect = 1e-31 Identities = 156/201 (78%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || ||||| || ||||||||||| ||||||||||| ||||| | ||| | Sbjct 22207 ACGAAGGCGGAGAACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTCAAAG- 22149 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | ||||| || || ||||| || ||||| || | || ||||||||||| || | || Sbjct 22148 TGCGGCCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGGATTC 22089 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 | ||||| ||||||||||| || ||||| |||||||| || || ||||||||| | Sbjct 22088 CCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACCTCAA 22029 Query 211072 GAGTGATCGTCTTTCCCGTGA 211092 | ||||| |||||||| |||| Sbjct 22028 GGGTGATGGTCTTTCCGGTGA 22008 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | || | || || || ||||||||||| || || | ||| || Sbjct 22719 ACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGT 22660 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || || |||||||| |||||||| ||||| || | || Sbjct 22659 GCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACC 22600 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| ||||| || ||||| ||||| || |||||||| | Sbjct 22599 CTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCAA 22540 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| |||||||| ||||||||||| || || | ||||| Sbjct 22539 AGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || | |||||| || || || ||||| ||||| ||||| | ||||| Sbjct 22491 ACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGT 22432 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || || || || || || || | || ||||| || ||||||| || Sbjct 22431 ACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCC 22372 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| |||||||| || || || |||||||| || || || |||||||| Sbjct 22371 TTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAG 22312 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| ||||| || || |||||||| || Sbjct 22311 GGTGATAGTCTTACCAGTAAGAGTCTTGAC 22282 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | || || || ||||| ||||||||||||| |||||| Sbjct 22947 ACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGT 22888 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| |||| |||||| || || ||||| | ||||||||||| || || | || Sbjct 22887 TCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACC 22828 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || |||||||| || ||||| ||||| || || || ||| || || | Sbjct 22827 CTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTACTTCTAA 22768 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || | ||||| || || | |||||| Sbjct 22767 TGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 >seq102 Length=67028 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| || || | || || | ||| || || || ||||| || |||||||| Sbjct 14445 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 14504 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | |||||||| || || |||| ||| |||||||| |||||||| || || || ||| Sbjct 14505 AAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCG 14564 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||||||| || ||||| |||||||| ||||| ||||| || ||||| || || Sbjct 14565 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 14623 >seq1972 Length=10305 Score = 113 bits (124), Expect = 1e-19 Identities = 195/280 (70%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 |||| |||||||||||||||||| || ||||||||||| ||||| || || Sbjct 7638 CCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTT 7579 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 || ||| | ||||||| | ||||| | |||||||| || || || |||||| Sbjct 7578 CCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGATAGTCTTG 7519 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | || ||| | ||||| || ||| |||||| ||||||| ||| ||||| ||| Sbjct 7518 CGACCCTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCCTCGAACTCCTCGCCATAAACA 7459 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCG-TCTTCCTTC-A 178325 || | | || || |||||| ||||| | | | |||||| ||| |||| ||| | Sbjct 7458 TCTGCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTT--TTCAA 7401 Query 178326 CTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 | || |||||||| || |||| |||| | ||||||||| Sbjct 7400 CACGCTTCATGAATAGATCAGGAATCCACAAGGCATAGAA 7361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158978235870500