Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq306 122 6e-23 seq477 89.7 3e-13 >seq306 Length=72094 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| ||||| ||||| ||||| ||||| || || Sbjct 24811 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 24752 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 24751 GACACAATCGACAATGTCAAGGC-CAAGATCCAAGACAAGGAGGGAATCCCACCCGACCA 24693 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| || || || ||||| || ||||| ||||| | ||||| | ||| ||||| Sbjct 24692 ACAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAA 24633 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| ||||| |||||||| | || || || ||| Sbjct 24632 CATCCAAAAGGAGTCCACTCTTCACTTGGTGTTA 24599 >seq477 Length=47751 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || || || || || || || ||||| ||||| || || || | || || | | Sbjct 22280 TCGTCAAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCG 22339 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | ||| | || | || | | ||||| ||||| | || || |||||||||||||| Sbjct 22340 ACAATGTCAAGGCCAAGA-TCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTG 22398 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || |||||||| |||||||| || || | || || | |||||||||||| ||||| Sbjct 22399 ATTTTTGCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAG 22458 Query 23800 GAGTCCACATTACATTTAGTT 23820 || || || | || |||||| Sbjct 22459 GAATCTACCCTTCACTTAGTT 22479 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 23633 TCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAAC 23692 |||| ||||| || ||||| || || ||||| || | || || | || | | || Sbjct 22008 TCACCGGAAAGACCATCACCCTTGAGGTTGAATCTTCCGATACCATCGACAACGTCAAGG 22067 Query 23693 AAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCA 23752 || || || || || || | || || || ||||||||||| || || ||||| | Sbjct 22068 CCAAGATCCAGGATAAGGAGGGAATCCCACCTGACCAACAGCGTTTGATTTTCGCCGGAA 22127 Query 23753 AACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTAC 23812 | ||||| || || | |||||||| | ||||||||||| ||||| |||||||| | | Sbjct 22128 AGCAACTTGAGGATGGCCGCACTTTGAGTGATTACAACATCCAAAAGGAGTCCACTCTCC 22187 Query 23813 ATTTAGTT 23820 || | ||| Sbjct 22188 ATCTTGTT 22195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337961401943600