Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1972 324 2e-83 seq32 109 8e-19 >seq1972 Length=10305 Score = 324 bits (358), Expect = 2e-83 Identities = 1339/2081 (64%), Gaps = 56/2081 (3%) Strand=Plus/Minus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || || ||||| || | || || | | ||||||| ||||||||| Sbjct 8644 TTCTTGATCGACGGTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACAT 8585 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 || || || | |||| |||| || || ||||| ||| | ||| | Sbjct 8584 TCCGGTCTTCAAGCCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGT 8525 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 |||||| || ||||| ||||| || ||| ||||||||| || || || | |||||| Sbjct 8524 AGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGC 8465 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 ||||||| | || || ||||| ||||||||||| || ||| ||| ||||| Sbjct 8464 AGCCATTTGAACGATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGAT 8405 Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 ||| |||||| ||| | | |||||||| || |||||||| | || || || || Sbjct 8404 GTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTT 8345 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 || | || ||| | | | || | | | ||||| || || || | Sbjct 8344 CATGTTGTCGGACCAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGAC 8285 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 |||||| ||||||| | || | ||| | || || || || ||||| || | | | Sbjct 8284 TTGAAACTCTCCAGCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACA 8225 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 ||||||| || | |||||| | |||| ||||||||||||||||| || || || | Sbjct 8224 TTCATTGAAGCCAAGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCG 8166 Query 77246 ATTTCTGAGACCATGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 77303 | || || || ||||| |||| | || | | | | ||||||||| | || Sbjct 8165 AGTTGCGA-ACTCCGTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCA 8107 Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTT----ACTAGCATATGATCC 77359 | |||| |||| |||| | || ||||| || || || ||| | || || Sbjct 8106 GTAGGTGTAACACCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGG----GAGCC 8051 Query 77360 ATTATATGTTTCATAAGGTCC---TTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 | || || || || || || ||| || || | | || | || || || Sbjct 8050 TTGGTAAGTCTCGTATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGC 7994 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAA 77475 ||| || || || |||||||| | | || |||| |||| ||||| |||| Sbjct 7993 AGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAA 7935 Query 77476 ACGGATAATGTAAAAG--AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 | ||| | | || | || |||| |||| || | || ||||| |||| | | ||||| Sbjct 7934 ATGGAAGACG-AAGGGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGG 7877 Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593 || || | |||| || | |||||||||| ||||| || || ||||| || || Sbjct 7876 TCGGTGACGGAAATTGCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGAT 7817 Query 77594 TTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCT 77653 || || | ||||||||||| |||| ||| || || | || || | ||||| | | Sbjct 7816 CTTGTTCAAGTTTCTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGT 7757 Query 77654 TCCATCTATAAC----AAACATGTTC--AAAGCTATAGATGCTAGATTACAAACTGCTAC 77707 ||| || | | | | | ||| || || || || || | |||||| || || Sbjct 7756 TCCCTCATTCATGTTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAAC 7697 Query 77708 CTCATTAGCGTTG--GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTG 77765 ||||| || || | || | | ||||| || || | || || || || Sbjct 7696 CTCATC--CGGTGCAGAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTA 7639 Query 77766 CCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTC 77825 || || || | |||||||||||| || ||||||| || || ||||| || || || | Sbjct 7638 CCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTT 7579 Query 77826 CCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT 77885 ||||| || | || | || | |||||| | ||| | | || || || || Sbjct 7578 CCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTC 7522 Query 77886 TTGTATCGCCTCTCT--CTT-TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCC 77940 ||| | | | || ||| ||||| || ||| | |||| || || || || || Sbjct 7521 TTGCGACCCTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCAT 7464 Query 77941 AAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCT 78000 ||||||| |||| |||||||| ||||| ||||||||||| | ||| || || | | | Sbjct 7463 AAACATCTGCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTT 7404 Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060 ||| || ||||| || |||||||| ||||| | ||| || ||||| || | | | Sbjct 7403 CAACACGCTTCATGAATAGATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAA 7344 Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 |||||| || || || || ||||| |||||||| | || ||| | |||||||| Sbjct 7343 CTTCTTCCTTACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATG 7284 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180 |||| || || | || | | | ||||| || || ||||| || ||||| | |||||||| Sbjct 7283 GTTCAAGGTAGACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGG 7224 Query 78181 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAG 78240 | ||||| || |||||| | ||| |||| ||||||||| || |||| || || |||| Sbjct 7223 CAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAG 7164 Query 78241 AAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCT 78300 || || ||| | || ||||| | |||| | || || || || || ||| Sbjct 7163 CGATGTATGCACCAGTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCT 7104 Query 78301 TAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA 78360 | || || | || ||| ||||| |||||||||||||| || |||||||| ||| ||| Sbjct 7103 TCGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCA 7044 Query 78361 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCG 78420 | | | || || || || | ||| || ||| ||||| ||| | ||| | Sbjct 7043 TATCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTG 6984 Query 78421 GAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTA 78480 | || || || ||||| | || | || | | || || ||||| ||||| ||| | Sbjct 6983 GGGAAGCGTGTGTAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGA 6924 Query 78481 TGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACC 78539 |||| || | ||||| || || || |||||||| | ||| || || || | || | Sbjct 6923 TGTCATCACCG-TGAATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCA 6865 Query 78540 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 78599 || || | || | |||||| || | || || || || ||||| | | Sbjct 6864 ACTTTGCCATCAAGACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGG 6805 Query 78600 TA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657 || ||||| |||| || || | || |||| || |||| |||| | | | ||| Sbjct 6804 TAGTTGAAA--TCTCGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAA 6747 Query 78658 CAATATCCATGACAGTAGTTG-AAATAATAGGAGATCGTACACCATTTTTAGGATTAACA 78716 | | || | | | | ||| ||| ||||||||| | |||||| | || || | Sbjct 6746 C-ACATTCGTAAGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTA 6688 Query 78717 TAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTA 78776 || | ||||||| || || | |||| |||| || |||| ||||| || || Sbjct 6687 TATTGGTATAAATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTT 6628 Query 78777 GATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 || || || || | ||||||||||| |||||||| ||||| Sbjct 6627 GAGACTGCAATACGAGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 109 bits (120), Expect = 8e-19 Identities = 180/259 (69%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 |||||||||| || || || || || || || ||||| || ||||| || |||| || Sbjct 142827 TTTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCATCTAGCCTCTGGGA 142886 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || || || || |||| ||| |||| ||||| || || |||||||| || | Sbjct 142887 TTTGAACTTCGCCACTGAATCTCTCAACCAAGTTCTCGTTGACAATTCCATCGGATGCTG 142946 Query 48556 CAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT---ATTCC 48612 | || ||||| | || || ||| || || |||| | | | ||| | ||||| Sbjct 142947 CGAAGAATGCGAGGACGTGGGAAATGAAGTAACGCTCGTCGTCATTGAGTCTCTCATTCC 143006 Query 48613 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTT 48672 |||| | | ||| ||||||| ||| | ||||| || ||||| || ||||||||||| | Sbjct 143007 AGTCGTGAAGATCCTTTGATAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCT 143066 Query 48673 TTTTATACATATTCCATAT 48691 | || ||||| | ||| || Sbjct 143067 TCTTGTACATTTGCCAGAT 143085 Score = 104 bits (114), Expect = 3e-17 Identities = 299/454 (66%), Gaps = 12/454 (3%) Strand=Plus/Plus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 |||||| || ||||| || ||||| || | |||||||| || || || || || | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAA-AtttttttAAATC 47955 ||| || ||||| ||||| || || ||||| || | | || || | || | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACC 142288 Query 47956 CTAATTCTGAAATCAGT---CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCAC 48012 | || |||| || | ||| |||||||| || || ||| ||||| | | Sbjct 142289 CAAA----GAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGG 142344 Query 48013 AATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGA 48072 | ||||| || | || | || |||||||| || | ||||||||||| || || Sbjct 142345 AGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGA 142404 Query 48073 CAGCATCCACTATTATCGATGTT--ACCGTTTCCTCACTTGGTGGATACAACAAATGTTT 48130 |||| || || | || | || || | || || ||| | | | | ||| Sbjct 142405 CAGCTTCGGTGATGA-CG-TCTTGGACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGA 142462 Query 48131 AAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGA 48190 || | | ||||| ||||| |||||||||||||| | || | |||||| || Sbjct 142463 GAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGA 142522 Query 48191 AAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCC 48250 || |||||||||| ||| || ||||| || ||||||||||| || | ||||| ||||| Sbjct 142523 GAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCC 142582 Query 48251 AGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 ||| ||||| || || || || || || || ||| Sbjct 142583 AGAGAAGAAGATACCCTCAACAGCAGCGAAAGCG 142616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694567204688000