Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq306 140 7e-28 seq477 100 7e-16 seq1972 93.3 1e-13 >seq306 Length=72094 Score = 140 bits (154), Expect = 7e-28 Identities = 159/210 (76%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| |||||||||||||| |||| | || | |||||||| | Sbjct 24605 CAAG-TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCGA 24663 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| ||||||||||| | | ||| ||||| | | |||||| ||||| ||||| Sbjct 24664 GTTGCTTT--CCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTG 24721 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | |||| ||| ||| || || || || || ||||| Sbjct 24722 GATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTT 24781 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||| ||||| ||||||| |||||| Sbjct 24782 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||||| ||||| || ||||| ||||||||||||| | || | Sbjct 22487 AGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGG 22428 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || ||| ||||| || || | | ||| || || | | || |||||| Sbjct 22427 CCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCC 22368 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || |||||| | || | | | || ||| ||| || || || || Sbjct 22367 TTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTG 22308 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 ||||| || || || |||||||| |||| Sbjct 22307 ATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| | || || || |||||||||||||| |||| | ||| | |||||| Sbjct 22709 AGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCT 22650 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || |||||||| | || || || | | ||| || ||||| ||| Sbjct 22649 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCT 22590 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | |||| || ||| || || | ||| || || Sbjct 22589 TGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTC 22530 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||||| ||||| Sbjct 22529 TTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| |||||||| ||||| ||||| ||||||||||||||||| ||||| | ||||| Sbjct 22198 GAGAACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTCAAAGTGCGGCCATC 22139 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| |||||||| || | | ||| ||||| | | |||||| ||||| Sbjct 22138 CTCAAGTTGCTTT--CCGGCGAAAATCAAACGCTGTTGGTCAGGTGGGATTCCCTCCTTA 22081 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || ||||| | || | | | || ||| || || ||||| || || Sbjct 22080 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACCTCAAGGGTGATG 22021 Query 152070 GTTTTGCCCGTGA 152082 || || || |||| Sbjct 22020 GTCTTTCCGGTGA 22008 >seq1972 Length=10305 Score = 93.3 bits (102), Expect = 1e-13 Identities = 195/283 (69%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||||||| | |||| ||||||| || |||||||| || | |||||| |||| Sbjct 7361 TTCTATGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAACGGAGAGTGG 7420 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | | | || || ||||| |||||| | | ||||||||||| ||||| ||| Sbjct 7421 ACTTTGATGTGCCCGAATGAGTGCCCTGGCTTGGCAGATGTTTATGGCGAGGAGTTCGAG 7480 Query 115749 AATCTTTACGAAAGGTACGAGAAAG-AGGGAAGAGCCAAAAGGGTTGTGAAGGCGCAAGA 115807 ||| |||||||| || ||||| | ||| ||| | | || | | | ||||| ||| | Sbjct 7481 GCTCTCTACGAAAGTTATGAGAAGGCAGGCAAGGGTCGCAA-GACTATCAAGGCACAAAA 7539 Query 115808 CCTTTGGCATCATATCCTTGTCACACAGTCAGAGGTCGGAATGCCCTTTATTGC-GTACA 115866 |||||| | ||| |||| | || | ||| ||||| |||||| ||| |||| Sbjct 7540 GCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAA-ACCCTTTCATGCTTTACA 7598 Query 115867 AAGATGCAGTTTGTCGA-AAGAGCAATCAAAAGAATTTCGGTA 115908 |||||||| | | | |||||||| |||||||| | |||| Sbjct 7599 AAGATGCA-TGCAACAAGAAGAGCAACCAAAAGAACCTTGGTA 7640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153647835050700