Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq477 205 2e-47 seq306 181 2e-40 seq102 156 9e-33 seq503 87.8 4e-12 >seq477 Length=47751 Score = 205 bits (226), Expect = 2e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| |||||| || ||| ||||||||||||||||| | Sbjct 22725 ACCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGA 22666 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || ||||| || || |||||||| | ||||||||| ||| || Sbjct 22665 AAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGG 22606 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||| || || || | |||||||||||||| | || || Sbjct 22605 GATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAAC 22546 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | |||||| ||||| || ||||| Sbjct 22545 CTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || || || ||| ||||| ||||| || || | Sbjct 22953 ACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGA 22894 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||||||||| | || || || ||||||||||| ||||||||||| || Sbjct 22893 AAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGG 22834 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| ||||||||||| || || ||| |||||||||| || || | ||| || Sbjct 22833 GATACCCTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTAC 22774 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 22773 TTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 163 bits (180), Expect = 6e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || || | || | || ||| ||||| |||||||| || | Sbjct 22497 ACCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGA 22438 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| |||||||| |||||||| |||||||| ||||| || || Sbjct 22437 GAGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGG 22378 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||| || || || | ||||| || || |||| ||||| Sbjct 22377 AATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGAC 22318 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| |||||||| || | |||||| |||| Sbjct 22317 CTCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | ||| || |||||||||||||| ||| Sbjct 22213 ACCACCACGAAGGCGGAGAACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACT 22154 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| ||||| || ||||| || |||||||| ||||||||| || Sbjct 22153 CAAAGTGCGGCCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGG 22094 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| || || ||| | ||||| || || |||| ||| || Sbjct 22093 GATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAAC 22034 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 22033 CTCAAGGGTGATGGTCTTTCCGGT 22010 >seq306 Length=72094 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| || | ||| || ||||||||||||||||| | Sbjct 24584 ACCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 24643 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || ||||| || ||||| |||||||| || |||||||| || Sbjct 24644 GAGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGG 24703 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| || || || | ||||| |||||||||| || || Sbjct 24704 GATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAAC 24763 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 24764 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq102 Length=67028 Score = 156 bits (172), Expect = 9e-33 Identities = 142/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 ||||||||||||||||| | || || || || ||||| ||||| || || || |||||| Sbjct 14445 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 14504 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||||||||| || ||||| |||||||||||||||||||| || || || | ||| Sbjct 14505 AAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCG 14564 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| || |||||||| ||||| ||||| | ||||| ||||| Sbjct 14565 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 14623 >seq503 Length=29792 Score = 87.8 bits (96), Expect = 4e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 315605 CAACGGCCCAGTTTTCGACACACACGTTTTTAACAAATTCGCCACTGTGACTAATCACCA 315664 ||||||||||| ||| || | ||| || || || ||||||| |||| | | Sbjct 1398 CAACGGCCCAGACTTCCTCAGTGATGTTCTTTGTGAACTCAGCACTGTGGGTAATGATGA 1457 Query 315665 CCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCA 315724 || ||||| |||| ||||||| |||| | || |||||||||| || ||||||| Sbjct 1458 TAACACCACCCTCGAAGCTCTTAAGAGCCTTGGACAAGGCACCGAGAGAGTCACGGTCCA 1517 Query 315725 CAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCG 315783 ||||||| ||||| ||||||||||| | || || ||||||| |||| || || Sbjct 1518 AGTAGTTGGTAGGCTCGTCAAGAACGATCAAATGAGGACGTTGCCA-CGAGCAAGCAGCG 1576 Query 315784 ATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAG 315835 | ||| | ||| | ||| || ||||| || || ||||| || |||| Sbjct 1577 AGAACAACCTTAACACGTTGACCTCCAGAAAGACCCAACATGCGGGAGTGAG 1628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046582287251800