Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq306 132 3e-26 seq477 114 9e-21 seq102 102 6e-17 >seq306 Length=72094 Score = 132 bits (146), Expect = 3e-26 Identities = 160/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 ||||||| |||||| ||| |||||||||||||||||| |||| ||| ||| | || Sbjct 24600 AACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 24659 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || || ||||| ||||| |||||||| ||||| || || | || | || ||||| || Sbjct 24660 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 24719 Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 ||||| ||| || ||| | || ||||| | || || ||||| | || || | Sbjct 24720 TGGATCTTGGCCTTGACATTGT--CGATTGTGTCCGAAGACTCAACCTCGAGGGTGATGG 24777 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || |||||||||||||| |||||||| ||||||| Sbjct 24778 TTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 24813 >seq477 Length=47751 Score = 114 bits (126), Expect = 9e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||||||||||||||| |||| || ||| | || || || ||||| || |||||| Sbjct 22688 TCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAG 22629 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| || ||||| | || | ||| ||||| || ||||| ||||| | Sbjct 22628 ATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTG 22569 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||| | || || ||||||| || || |||||||| ||||| ||||| ||| Sbjct 22568 TCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACG 22509 Query 44327 AAGATTTGCAT 44337 ||||||||||| Sbjct 22508 AAGATTTGCAT 22498 Score = 105 bits (116), Expect = 5e-18 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||||| | || | |||||| || |||||||| |||||||| Sbjct 22503 TTGCATACCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTA 22444 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| ||| || | || || || || || |||||||| ||||||||||| ||||| Sbjct 22443 ATCGGAGAGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATC 22384 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | ||| | |||||||| || ||||| ||| || ||| | ||||| |||| Sbjct 22383 GGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGT--CGATGGTATCGGAA 22326 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 || || ||||| | || || ||||| || || || ||||| |||| Sbjct 22325 GACTCGACCTCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| ||||||||||||||||||||| | ||| | || || Sbjct 22194 ACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTCAAAGTGCGGCCATCCTCA 22135 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| || ||||||||||| || || | || | || ||||| ||| Sbjct 22134 AGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGGATTCCCTCCTTATCCTGG 22075 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| |||| ||||| ||||| | || || |||||| Sbjct 22074 ATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACCTCAAGGGTGATGGTCTTT 22015 Query 44309 CCCGTGA 44315 || |||| Sbjct 22014 CCGGTGA 22008 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||||| ||||| ||||| | || || || | || |||| |||||| || |||| Sbjct 22916 TCCTTTTGAATGTTATAATCCGAAAG--GGTTCTGCCATCCTCCAACTGCTTTCCAGCAA 22859 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||| || || || || | || | ||| ||||| || ||||| || | || | Sbjct 22858 AGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTT-AGCCTTAACG 22800 Query 44265 TT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | || || || | ||||| || || | ||||| |||||||| || | |||||| Sbjct 22799 TTATCGATAGTATCTGACGATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTG 22740 Query 44324 ACGAAGATTTGCAT 44337 ||||| || ||||| Sbjct 22739 ACGAAAATCTGCAT 22726 >seq102 Length=67028 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||||||||||||||| || | ||| || |||| || || ||||| || || |||| Sbjct 14443 CCTTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 14502 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||||||| || ||||| | || | || ||||| || ||||| ||| || ||| Sbjct 14503 TCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGT 14562 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 14563 --CGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGAC 14620 Query 44326 GAAG 44329 |||| Sbjct 14621 GAAG 14624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359939067618900