Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq306 150 4e-31 seq477 132 1e-25 seq102 107 5e-18 >seq306 Length=72094 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || ||||| |||||||||||||| || || ||| Sbjct 24808 CAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGAC 24749 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| || ||||| || |||||||| || ||||| || Sbjct 24748 ACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAACAG 24689 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||||||||| || ||||||||||| | || || |||| || ||| || Sbjct 24688 CGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAACATC 24629 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 24628 CAAAAGGAGTCCACTCTTCA-CTTG 24605 >seq477 Length=47751 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| ||||| || |||||||| ||||| ||| || || |||||||| |||||||| Sbjct 22008 TCACCGGAAAGACCATCACCCTTGAGGTTGAATCTTCCGATACCATCGACAACGTCAAGG 22067 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| ||||| || || |||||||| || ||||| || || | || |||||||||| Sbjct 22068 CCAAGATCCAGGATAAGGAGGGAATCCCACCTGACCAACAGCGTTTGATTTTCGCCGGAA 22127 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | || || || ||||| | ||| | ||||| ||| ||||||| || || || || | Sbjct 22128 AGCAACTTGAGGATGGCCGCACTTTGAGTGATTACAACATCCAAAAGGAGTCCACTCTCC 22187 Query 178123 ATCTTGTT 178130 |||||||| Sbjct 22188 ATCTTGTT 22195 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || ||||| || || || || |||||||||||||| || || || ||||||| Sbjct 22280 TCGTCAAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCG 22339 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| || ||||| ||||| || ||||| || || || || | | Sbjct 22340 ACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGA 22399 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | || ||||| ||||| ||||| ||||| | || || ||||||| ||| | ||||| | Sbjct 22400 TTTTTGCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGG 22459 Query 178111 AATCAACACTGCATCTTGTTTTGAGACT 178138 |||| || || || | ||| | ||||| Sbjct 22460 AATCTACCCTTCACTTAGTTCTCAGACT 22487 >seq102 Length=67028 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || ||||| || ||||| || ||| ||||||||| Sbjct 14623 TTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCTGACACCATC 14564 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || ||||| || ||||| || ||||| || || || || ||||| | Sbjct 14563 GACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTG 14504 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| ||||| || || || || ||| | ||||| | || || ||| ||||||| Sbjct 14503 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAA 14445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203550753169800