Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq306 145 7e-30 seq477 86.0 6e-12 >seq306 Length=72094 Score = 145 bits (160), Expect = 7e-30 Identities = 173/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || ||||||||||||| || || ||| |||||| || ||||| |||||| Sbjct 24582 CCACCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 24641 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| | || ||||| ||||| |||||||| |||| ||||||||||| | Sbjct 24642 GAGAGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGT 24701 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810 || | | ||||||||| ||| || ||| || | || | ||||| |||| Sbjct 24702 GGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCG--ATTGTGTCCGAAGACT 24759 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| | || || ||||| ||||| || ||||| ||||| ||||||||| Sbjct 24760 CAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 24812 >seq477 Length=47751 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||| |||||||| || ||||||||||| || | || ||||| || || ||||| || Sbjct 22460 TCCTTTTGAATGTTGTAATCGGAGAGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAA 22401 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACG 41789 |||| |||||||| || | |||| || |||||||| ||| || ||| || | Sbjct 22400 ATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22341 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 || | || ||| ||||| ||||| | || || || ||||| || || ||||| | Sbjct 22340 TCG--ATGGTATCGGAAGACTCGACCTCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGA 22283 Query 41850 CGA 41852 ||| Sbjct 22282 CGA 22280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462236388040000