Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq210 118 2e-21 seq351 98.7 2e-15 >seq210 Length=376446 Score = 118 bits (130), Expect = 2e-21 Identities = 312/463 (67%), Gaps = 10/463 (2%) Strand=Plus/Plus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC- 230238 |||| |||||||| | | | ||||||||| || | ||||| || ||| ||| | Sbjct 39502 AGCGCCTCGTCGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGATCCTTC-GCGTCT 39560 Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 230298 ||||| ||| || ||| ||| ||||||| || || | | || |||||| | ||| Sbjct 39561 ATCTTCTGGTTGAAGAAGCGCGGTCTGATGCCAGGTCTTACTTTTTCCAACGAGCTGATC 39620 Query 230299 AGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTAT-GTATTCAAAGCTCCAGAA 230357 ||| || ||||| ||||| | || | | |||| | || || | ||| | || Sbjct 39621 TCTCGTGATGAGGGCCTCCACACTGACTTTG-CTTGCTTGTTGTTCTCTCACCTCAACAA 39679 Query 230358 CAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGG 230416 | | | || | ||||||| || | |||||||| || || || | | ||| | | Sbjct 39680 CCGCCCCAGCAAGC-AGACGGTACAAAACATCATTACTGAGGCTGTCGCTATTGAACAAG 39738 Query 230417 AGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGA 230475 |||| | | || ||| ||||| || || || | ||||||||| || | || ||| | Sbjct 39739 AGTTTCTGTCAGATGCTCTTCCA-GTGGCGCTCCTCGGCATGAACTCTAAGCTCATGTGC 39797 Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG-TA 230534 ||||| ||||| ||||| || || || || | ||| | |||||| ||| | |||| || Sbjct 39798 CAGTATATCGAGTTCGTTGCTGATCGTCTTCTGGTTTCTCTTGGTAACG-GCAAGTACTA 39856 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 | | || | ||||| || | || ||||| ||| || | || ||||||||||| Sbjct 39857 CCATTCCACCAACCCATTCGATTTCATGGACAACATCTCCTTGTCCGGTAAGACCAACTT 39916 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||| || ||||| | ||||| |||| | | ||||| ||| Sbjct 39917 CTTCGAGAAACGTGTTGGCGACTACCAGAAGGCAGGTGTCATG 39959 >seq351 Length=143941 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 319451 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 319510 ||||||| ||| ||| ||||| || | || || || || |||||||| |||| Sbjct 128201 GTTCGTAGTGGTAGATATCCGTGCACACCTCATCCAGAAAGCCCGAGTCGTGACTGACAA 128142 Query 319511 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACA 319570 ||| || | | ||| || | || ||| || || |||||| ||||||| | | Sbjct 128141 TCAAGCTGGTGATGTCAGTATGTTTCTTCAAATACTCCTGCAACCATTTCACGTTCGCGA 128082 Query 319571 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCAC 319630 || |||||||| ||||||||||| || || || | | || |||| ||||| || | Sbjct 128081 CATCGAGATGGTTAGTCGGCTCGTCCAGGAGGAGCACATCGGCCTTCATCAGCATGGCGC 128022 Query 319631 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGA 319664 | ||||||||||||||||| ||||| || || || Sbjct 128021 GGGCAAGAGCGAGTTTCATCTTCCAGCCACCAGA 127988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818659972220