Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq210 96.9 4e-15 >seq210 Length=376446 Score = 96.9 bits (106), Expect = 4e-15 Identities = 176/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| || ||||| || ||||| |||||||||||||| ||||| || | || Sbjct 39294 TCGGAGTGGATATTCTCGATCATGATCTGGAATCCATAGAAGCAACGAGCTTCAGGAATC 39235 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || || || || ||| | ||||||||||| || || ||||| |||||| Sbjct 39234 TGAACCTCGCCGCTGAAACGCTCCACGAGGTTCTCATTGACAATTCCGTCGGAGGCAGCA 39175 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAATATGCCAA 16678 || || || | | ||| |||||| || |||||| ||| || | ||||| Sbjct 39174 AAGAAGGCGAGGACGTGGGAAATGAAGTAGCGCTCGTCATCGTTAAGGCGATTGTGCCAG 39115 Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738 || | | || ||||| | || | ||| || | ||||||||| ||| | ||||| Sbjct 39114 TCGTGAAGGTCCTTGGACAAGTCAATTTCCTCGGCTGTCCAAAAGGAGGCCTCGGCCTTC 39055 Query 16739 TTATACATTTTCCAAAT 16755 || ||||||| ||| || Sbjct 39054 TTGTACATTTGCCAGAT 39038 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 16237 GATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATAT 16296 ||| || |||||||||||||| | |||||||| || || ||||| |||||||| || Sbjct 39620 GATCAGCTCGTTGGAAAAAGTAAGACCTGGCATCAGACCGCGCTTCTTCAACCAGAAGAT 39561 Query 16297 CGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGA 16346 | || || || || |||||||| || || ||||||| |||||||||| Sbjct 39560 AGACGCGAAGGATCCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCGA 39511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511411881284080