Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq210 140 4e-28 seq330 134 2e-26 >seq210 Length=376446 Score = 140 bits (154), Expect = 4e-28 Identities = 295/437 (68%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 || ||||| || || |||||||| ||||| || || || ||||| || || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||||||| |||| ||||| || ||| | ||| | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 23964 AAT---CTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATA 24020 | | ||| || || ||||| ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080 || ||||||||||| | | ||||| ||||||||||||| ||| || || || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 24081 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 || | ||| || | | || || | | | || |||| ||| || || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGCA 39650 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 || || ||| || ||||| || | | || | ||||||||||| || || || ||| Sbjct 39649 AAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGGC 39590 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260 || || || ||||| || | ||| || || ||||| || |||||||||||||| |||||| Sbjct 39589 ATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCCT 39530 Query 24261 TCTACTGCCGCAAAGGC 24277 || || |||||||| || Sbjct 39529 TCAACAGCCGCAAAAGC 39513 >seq330 Length=277972 Score = 134 bits (148), Expect = 2e-26 Identities = 577/901 (64%), Gaps = 16/901 (2%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || || || ||||| | |||| | ||| ||||| |||| || || | | || | Sbjct 170532 TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTC 170473 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| || ||||| ||||| || | || ||| |||||||||| | || Sbjct 170472 CAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAAC 170413 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | | ||| |||||| ||||| || || ||||| | ||| | | | Sbjct 170412 AGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAA 170353 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | |||| ||||| || || | ||| || | | | | || || || ||||| || || Sbjct 170352 ACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCT 170293 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 ||||| | |||||| || ||||| || | |||| | ||| |||| ||| |||||||| Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 54309 | ||||||||||| | || ||| ||| |||| ||||| | | || | || || Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCC 170174 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || || | || || || | || || || || ||||||||||| || || Sbjct 170173 AATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTC 170114 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 ||||| || || |||| | | | ||||| | || || | ||| || Sbjct 170113 AATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCC 170054 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 ||||| || | || || || || || || || |||| | ||| | | | || || Sbjct 170053 GGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGT 169994 Query 54490 CTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATG 54547 ||| || || || |||| ||||| ||| ||||| || || || | ||| |||||| Sbjct 169993 CTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATG 169936 Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607 ||||| || | ||| | | ||| || || |||| ||| || || | ||| Sbjct 169935 TGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTT 169876 Query 54608 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665 || ||||| || | ||||| ||||| || || ||||| | || | ||||| || | Sbjct 169875 TTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCT 169818 Query 54666 TATCCTTATATTTGTTAACTACATCCAT-GGTAATACTTGAAATAATCGGAGAATGTTTC 54724 |||| | || | | || | ||| || | | || || ||||| | ||| Sbjct 169817 CATCCGCGTGCTTCATGA-TAGTTTCATATGTTTCATTGGATATCATCGGTGCTGGTTGA 169759 Query 54725 CCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACT--AAATAGttttt 54782 ||| || ||||| ||||| | | | | || || || || | |||| | || | Sbjct 169758 TTATTCTTCGGATTAACATAATAATAGAGGTCTGAAATGAC--CAATGAAAATTGCTTCT 169701 Query 54783 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT 54842 | || | ||||| ||||| || || ||||| | ||| || ||||| ||||| || || | Sbjct 169700 TGGTCTGCTTGTGAAGATTGGAGACAGCTATGCGAGCTGCGAGAATAGCATAGTCTGGGT 169641 Query 54843 G 54843 | Sbjct 169640 G 169640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718675921120