Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq210 159 4e-34 seq44 120 3e-22 seq111 109 6e-19 seq99 109 6e-19 >seq210 Length=376446 Score = 159 bits (176), Expect = 4e-34 Identities = 206/284 (73%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || || ||||| | |||||| | ||| || Sbjct 39038 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTTTGGACAGCCGAGGAAATTGACTTG 39097 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | ||||| |||||||| | ||||| Sbjct 39098 TCCAAGGACCTTCACGACTGGCACAATCGCCTTAACGATGACGAGCGCTACTTCATTTCC 39157 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| || || ||| |||||| || ||||| ||||| || || |||||| Sbjct 39158 CACGTCCTCGCCTTCTTTGCTGCCTCCGACGGAATTGTCAATGAGAACCTCGTGGAGCGT 39217 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | | || || || |||||||| || || |||||| || Sbjct 39218 TTCAGCGGCGAGGTTCAGATTCCTGAAGCTCGTTGCTTCTATGGATTCCAGATCATGATC 39277 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||| | ||||| || | ||||| |||||||||||| || Sbjct 39278 GAGAATATCCACTCCGAGACATATTCTCTCCTCATCGACACATA 39321 >seq44 Length=710769 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||||||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 242789 GACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 242730 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| ||| |||||||||||||||||||||| | || ||||| || ||| || Sbjct 242729 GACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTCGTGCTG 242670 Query 40903 CGCTTGAGGGGCGG 40916 ||| || | || || Sbjct 242669 CGCCTGCGTGGTGG 242656 >seq111 Length=1301451 Score = 109 bits (120), Expect = 6e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || ||||| ||||| |||||||| | || || || | | ||| | | Sbjct 1269185 TCGTCAAGACTCTCACTGGCAAGACCATCACACTTGAGGTTGAGTCGAGCGATACTATCG 1269244 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | ||||| || |||| ||||| ||||| |||||| | |||||||| || | | Sbjct 1269245 ACAATGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGA 1269304 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| ||| ||||| || || || || | |||||| | |||||||||||||||||||| Sbjct 1269305 TCTTCGCTGGCAAGCAACTTGAGGATGGCCGCACCTTGTCCGACTACAACATCCAGAAGG 1269364 Query 40880 AGGCCACGCTGCATCTAGTGTTGCG 40904 | |||| || ||||| || |||| Sbjct 1269365 AATCCACTCTCCATCTCGTCCTGCG 1269389 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || |||||||| || || ||||| |||| |||||| | | Sbjct 1269402 AATGCAGATTTTCGTCAAGACTCTCACGGGGAAGACTATCACTCTCGAAGTCGAATCTTC 1269461 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| | ||| || |||| || || ||||| || || | |||| Sbjct 1269462 TGACACTATCGACAACG-TGAAGACCAAGATTCAGGATAAGGAGGGAATTCCGCCTGACC 1269520 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| ||||| | ||| || || ||||| || || | || ||||| ||||||| Sbjct 1269521 AGCAACGTCTCATTTTCGCCGGAAAGCAGCTAGAGGATGGCCGTACCCTGTCTGACTACA 1269580 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 | ||||| || ||| |||| || || || || Sbjct 1269581 ATATCCAAAAAGAGTCCACCCTTCACCTTGT 1269611 Score = 102 bits (112), Expect = 8e-17 Identities = 125/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| |||||||| | || ||||| ||| ||||| | | | |||| ||||| Sbjct 1268910 ACTGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACCATCGATAACG-TCAAGAC 1268968 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| || ||||| || |||| ||||| || | |||| ||| || || Sbjct 1268969 CAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGAAA 1269028 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 |||||||| |||| ||||| ||| |||||| |||||||||||||| Sbjct 1269029 GCAGCTGGAGGACGGCCGCACTCTCTCCGACTATAACATCCAGAAGGA 1269076 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || || || || |||||| | || || || | | Sbjct 1269630 AATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCTTGGAAGTTGAGAGCTC 1269689 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | | ||| || |||| ||||| ||||| || || | || || Sbjct 1269690 AGACACCATTGACAATGTGAAGACGAAGATTCAGGACAAGGAGGGAATTCCACCTGATCA 1269749 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | ||||| || |||||||| Sbjct 1269750 GCAGCGTCTCATCTTCGCAGGGAAGCAGCTTGAAGATGGTCGCACTCTTTCTGACTACAA 1269809 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| ||| || || || ||| Sbjct 1269810 CATCCAGAAGGAGAGCACCCTTCACCTCGTG 1269840 >seq99 Length=529637 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || || || ||| |||| || ||| | | ||||| | | Sbjct 392848 TTCGTGAAGACCCTGACGGGTAAGACTATTACCCTCGATGTTGAATCGAGCGACACCATC 392789 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | || || || ||||||||| |||||||||| || | Sbjct 392788 GACAACG-TCAAGACCAAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGTTT 392730 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | || ||||| | |||||||||||||||||| Sbjct 392729 GATCTTCGCTGGTAAGCAGCTCGAGGATGGACGGACCCTGAGCGACTACAACATCCAGAA 392670 Query 40878 GG 40879 || Sbjct 392669 GG 392668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216662545440