Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq111 109 6e-19 seq99 100 3e-16 >seq111 Length=1301451 Score = 109 bits (120), Expect = 6e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| ||||| |||||||| |||| ||| || || | || ||||||||||| || ||||| Sbjct 1269594 CTCTTTTTGGATATTGTAGTCAGACAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAA 1269535 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| || |||||||| | ||| | | |||||| ||| ||| | || || | ||| Sbjct 1269534 AATGAGACGTTGCTGGTCAGGCGGAATTCCCTCCTTATCC-TGAATCTTGGTCTTCACGT 1269476 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||||| || |||| ||||| || || ||||| || ||||| | Sbjct 1269475 TGTCGATAGTGTCAGAAGATTCGACTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGA 1269416 Query 43171 CAAAGATTTGCATT 43184 | || || |||||| Sbjct 1269415 CGAAAATCTGCATT 1269402 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/202 (71%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| |||| ||||| || | || || |||||||| || Sbjct 1269827 GTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCAAGCTGCTTCCCT 1269768 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105 ||||| ||||| |||||||| || | || | | |||||||||| ||| | || || || Sbjct 1269767 GCGAAGATGAGACGCTGCTGATCAGGTGGAATTCCCTCCTTGTCC-TGAATCTTCGTCTT 1269709 Query 43106 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 | | | | ||||| |||| || || || | ||||| || || || || || Sbjct 1269708 CACATTGTCAATGGTGTCTGAGCTC---TCAACTTCCAAGGTGATCGTCTTCCCGGTCAG 1269652 Query 43163 CGTCTTTACAAAGATTTGCATT 43184 ||||| || ||||| |||||| Sbjct 1269651 AGTCTTGACGAAGATCTGCATT 1269630 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | || || || | || || || ||||| |||||||| Sbjct 1269365 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAG 1269306 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || | ||||||||||||| || | | |||||||||| ||| | || || |||| | Sbjct 1269305 ATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATT 1269247 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || |||||||| || || || | |||||||| ||||| || || ||||| || Sbjct 1269246 GTCGATAGTATCGCTCGACTCAACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 1269187 >seq99 Length=529637 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| ||||| | || || ||||||||||||||||| | Sbjct 392668 CCTTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGA 392727 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | ||||||||||| | || | || ||||| ||| ||| || |||| ||| | Sbjct 392728 TCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 392786 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||||||||||| ||||||| || || || || ||||| || ||||| || Sbjct 392787 TCGATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACG 392846 Query 43173 AA 43174 || Sbjct 392847 AA 392848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814783798320