Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq111 114 8e-21 seq44 102 5e-17 >seq111 Length=1301451 Score = 114 bits (126), Expect = 8e-21 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||| || || || | ||| ||| ||||| |||||||||||||| Sbjct 1269402 TCCACCACGGAGACGCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 1269343 Query 34222 CA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 || | || ||| | || || | |||||||| ||||| || | |||||||||||| || Sbjct 1269342 CAAGGTG-CGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGG 1269284 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | | ||||||||| ||||| ||| | || | | || | |||| |||| || | Sbjct 1269283 GGATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTATCGCTCGACTCAA 1269224 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||||||| ||||| |||||||| || || Sbjct 1269223 CCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 1269187 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| ||||| || | || || ||||| | || ||||| || || |||||||| || Sbjct 1269630 TCCACCGCGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGA 1269571 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| |||| | || || | |||||| || ||||||||||| || |||||||| || Sbjct 1269570 CAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGG 1269511 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||| || ||||| ||| | | | | || | || | |||||||| Sbjct 1269510 AATTCCCTCCTTATCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCAGAAGATTCGAC 1269451 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || |||||||| || || || |||||||| Sbjct 1269450 TTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCAT 1269403 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||| ||||| | || || || ||||| ||||||||||| || Sbjct 1269858 TCCACCACGGAGTCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGA 1269799 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || || | |||||| |||||||| ||||| |||||||| || || Sbjct 1269798 AAGAGTGCGACCATCTTCAAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGG 1269739 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | | || | || | || || Sbjct 1269738 AATTCCCTCCTTGTCCTGAATCTTCGTCTTCACATTGTCAATGGTGTCTGAGCTCTCAAC 1269679 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || ||||| ||||| || || ||||||||||| Sbjct 1269678 TTCCAAGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 1269631 >seq44 Length=710769 Score = 102 bits (112), Expect = 5e-17 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| ||||| | ||| || ||||| |||||||||||||| Sbjct 242656 CCACCACGCAGGCGCAGCACGAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 242715 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 ||| ||| |||| || | ||||||||| ||||| || || ||||||||||| | |||| Sbjct 242716 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGG 242775 Query 34282 CACGCTCTCCTTGTC 34296 | || ||||||||| Sbjct 242776 -ATGCCCTCCTTGTC 242789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070448648640