Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq330 174 1e-38 seq99 95.1 1e-14 seq111 93.3 4e-14 >seq330 Length=277972 Score = 174 bits (192), Expect = 1e-38 Identities = 416/628 (66%), Gaps = 6/628 (1%) Strand=Plus/Minus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || | ||||| |||| |||||| ||||||| || || || | || ||||| | Sbjct 170447 TCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAACAGGTCACGAGCTCTGACTTCCTCCT 170388 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| ||| || | ||| || || || || || || | ||||| |||||||||| Sbjct 170387 TTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAAACATCATCGTGCCAAGGCTCGAGGT 170328 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | ||||| ||||| |||| ||| ||||| || ||||| ||||| | || ||||||| Sbjct 170327 AGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCTTGATCCACGTATCTCGCAGTGTTGT 170268 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 || | |||| ||||| || || | || ||||| | ||| || || | | Sbjct 170267 TGAATACTCGGAGCATGGGAACAATTCCATTGGAAGAGCCATTGGTCCCTGCAATGTAGG 170208 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 |||| | || |||| ||| | || | || || || ||| | | || || |||| Sbjct 170207 AACCAGTGGCGCGAATTCGGTGGATGTTAAGGCCAATACCACCGGCAGTCTTGGAAATCA 170148 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || || |||| || || ||||| || || || |||||| | || | |||||| Sbjct 170147 TGGCACAAGTCTTCAAGGTATCATAGATACCTTCAATACTGTCCGCCTTCATATCGACCA 170088 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 |||||||||| | || || || | || || |||| |||||| ||||| ||| | Sbjct 170087 AGAAACACGAGGCCAACTGAGCCTGTGGAGTGCCGGCATTGAACAGAGTCGGTGAGGCAT 170028 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || || ||| | ||||| | | || || || ||||| || || || | | Sbjct 170027 GGGTGAAATATTTCTGAGACATCAAGTGATAGGTCTCAATGGCCTTTTCGATATCATTGC 169968 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACCGTGACGC 23888 | ||||| || | ||| || | ||||| ||||| || || | ||| ||| | | Sbjct 169967 CATGTATTCCAACGGCCACTCTCATCAACATGTGCTGCGGGCGTTCGGCTACCTT---CC 169911 Query 23889 CGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAA 23948 | || || | ||| ||||| || | | |||||| || || || | | ||||| | Sbjct 169910 CATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTTTTGAAACCGAAGAAATTGTAGTTGA 169851 Query 23949 AGTCACGATCGTGCACTATGGCCGAATT 23976 | |||||||||| ||| || || || || Sbjct 169850 AATCACGATCGTACACGATCGCGGAGTT 169823 >seq99 Length=529637 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||| |||||| || ||||| | Sbjct 392849 TTTCGTGAAGACCCTGACGGGTAAGACTATTACCCTCGATGTTGAATCGAGCGACACCAT 392790 Query 31261 CGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 ||| | ||||| || ||| | ||| ||||||||| | || || |||||||||||| Sbjct 392789 CGACAACGTCAAGACCAAGA-TCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGTT 392731 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || |||||||| || ||| | || || ||| ||||||| || ||||| || | Sbjct 392730 TGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGGACCCTGAGCGACTACAACATCCAGA 392671 Query 31380 A 31380 | Sbjct 392670 A 392670 >seq111 Length=1301451 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| |||||||| || ||||| || ||||| | || ||||| || ||| | | ||| Sbjct 1269185 TCGTCAAGACTCTCACTGGCAAGACCATCACACTTGAGGTTGAGTCGAGCGATACTATCG 1269244 Query 31263 AAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | | ||||| || ||| | ||||||||| || | || ||||||||||||||| | Sbjct 1269245 ACAATGTCAAGACCAAGATTCA-GGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTG 1269303 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||||||||| || | || || || || ||| || ||||| || || Sbjct 1269304 ATCTTCGCTGGCAAGCAACTTGAGGATGGCCGCACCTTGTCCGACTACAACATCCAGAAG 1269363 Query 31382 GAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| ||||| || || Sbjct 1269364 GAATCCACTCTCCATCTCGTCCT 1269386 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| || || ||||||||| | || ||||| || Sbjct 1269631 ATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCTTGGAAGTTGAGAGCTCA 1269690 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || ||||||||| || | || || || ||| Sbjct 1269691 GACACCATTGACAATGTGAAGACGAAGATTCAGGACAAGGAGGGAATTCCACCTGATCAG 1269750 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||| || || ||| | ||||| Sbjct 1269751 CAGCGTCTCATCTTCGCAGGGAAGCAGCTTGAAGA 1269785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764204600480