Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq210 113 6e-20 seq330 104 3e-17 >seq210 Length=376446 Score = 113 bits (124), Expect = 6e-20 Identities = 291/438 (66%), Gaps = 8/438 (2%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 || ||||| || || |||||||| ||||| || || || || || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||||||||| || || ||||| || ||| | || | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 33411 AAT---CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATG 33467 | | ||| || ||||| || ||||| ||| | | | | ||||| || | | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 33468 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATA 33527 || ||||||||||| | | ||||| ||||||||||| | || || | || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 33528 ATAAATCTAACGGTTTCTTCACTCGGT-GGATGTAATAAATGTTTAAACATCAAACATGC 33586 || | || || | | || || || ||| | || |||| ||| || || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTG-AGGTGAGAGAACAACAAGCAAGC 39651 Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646 || || ||| || ||||| || | | || | ||||| ||||| || || || || Sbjct 39650 AAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGG 39591 Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706 ||| || || ||||| || | ||| || || || ||||| ||||| |||||||||||||| Sbjct 39590 CATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCC 39531 Query 33707 TTCTACTGCAGCAAAGGC 33724 ||| || || ||||| || Sbjct 39530 TTCAACAGCCGCAAAAGC 39513 >seq330 Length=277972 Score = 104 bits (114), Expect = 3e-17 Identities = 691/1109 (62%), Gaps = 21/1109 (2%) Strand=Plus/Minus Query 62031 TTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTAC 62090 || |||| |||| |||||| || || ||||| || |||| | || || || |||||| Sbjct 171756 TTCTCCTGATCCACTGTGAACTGGATAGGAGCAGAGGCGGCCATAGTGCGGAGGTAGTAC 171697 Query 62091 ATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAA 62150 || || || || || || | |||| ||| ||| ||||| || || | |||| | Sbjct 171696 ATGCCAGTCTTCAGTCCCATTTTCCACCCGGCAAAGTGCATGCTGGTAATTTTGCCCATA 171637 Query 62151 CTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCT 62210 | || ||| ||||| || || | ||| || || || ||| | || |||||||| Sbjct 171636 GTAGGCTCTTTCATATGAATGTTAAGAGACTGGGACTGGTCAATGTATGCACCCCTGTCA 171577 Query 62211 GCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTA 62270 |||||||| | | ||| | || | ||| ||||| | || ||||| | || Sbjct 171576 GCAGCCATCTGCAGGATGTTTCGCTGAGAAATCTCCCAGACGGTCTTATAGAGGGCTTTG 171517 Query 62271 ATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTC 62327 || || | |||| || | ||||||||| ||| || || ||| | ||||| | |||| Sbjct 171516 ATGTCCGCAGGAATATTAGGAATATTCTGAACGGAGCCGCCTTCTGCGATAATGCGATTC 171457 Query 62328 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACT 62387 || || | ||| ||| | | ||| | | | || || |||||| || Sbjct 171456 TTCATGTTGTCAGACCACAGTCCCAGATCGACGAGGTCCTTGAGAAGCCACGGGTTGACG 171397 Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 ||||| ||||| |||| | || | |||| ||| || || || ||||| || | Sbjct 171396 ACTTGAAATTCGCCAGCAAGGACCCGGCGAGAGTAGATGTTCGAAGTGTACGGCTCGAAG 171337 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 |||| || || | || || || ||| || |||||||| ||||||| || Sbjct 171336 CACTCGTTGAAGCCAAGTATCTGGCTGGTACTTGCCGTAGGCATAGGAGCCACCAGCAAG 171277 Query 62508 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567 ||||| | || ||| | | ||| ||| |||| || ||||| | ||| |||||| Sbjct 171276 CTATTGCGAACACCTTGTTGAGCGATCTTAGCTTTGAGGGAATCCCAGTCCCAGAGATCC 171217 Query 62568 GACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTAC----GATCC 62623 | ||| || || || || || |||| || || || Sbjct 171216 GTAGGTGTCCTGTCCCACATGTCGTACTGGAGGATCCC----CTGGGAGACAGGGGAGCC 171161 Query 62624 TACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACC 62683 |||| || |||||| || | || || || || | || || | ||| | Sbjct 171160 CTCATACGTTGAATATGGCCCGTACTCCTTCGCGAGATCGGAAGATGCAGTCAGGGCAGC 171101 Query 62684 GTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTA-TCAAATG 62742 || ||| || || || ||||||| | || || | | || || || | | ||||| | Sbjct 171100 GTGATAGATCGTCTCGAAGATCTGAATGTTCAGCTGCTTCGCCTC-GGCCGAGTCAAACG 171042 Query 62743 GATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62802 | || || ||||| || || | || | |||||||| | ||||| | || Sbjct 171041 GCAGGCGTAGCGCAAGGAACGCATCAGCAAGACCATTAACACCAAGGGCAATAGGGCGAT 170982 Query 62803 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 62862 | | ||| | | | || || || | |||||| || |||||||| | || || | Sbjct 170981 GGCGAAGGTTACTGTTCTGCGCCTCGGGCACAGGATAGTAGTTAATATCAACGATCTTGT 170922 Query 62863 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT-CGCC-- 62919 | || || | || | || | ||||| || | |||| | |||||| || |||| Sbjct 170921 TCAGGTTCCGAACGAGGACCTGCACCACTTCATGCAGTCTTCCGAAATCATATTCGCCAC 170862 Query 62920 ---CATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCAT 62976 || | |||||| | | |||| |||||||| ||||| || ||||| || | Sbjct 170861 GAGCAGCATCAACAAACGTAGGGAGGGCAAGAGATGCCAAGTTACAGACAGCTACTTCGT 170802 Query 62977 TAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | | | ||| |||| || ||||||||||| || || | ||||||||| | | Sbjct 170801 CCGGAGC-GCAGTATTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATAGTTCCGAGA 170743 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 || | || || ||||| |||| || | |||||||| | ||||| ||| | |||||| Sbjct 170742 TTCTTCTGGTTGCTCTTCCTGTTGCAAGAGTCCTTATACAACATGAAGGGATTTCCAGTT 170683 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCA 63124 || |||||| || | ||| || | ||| Sbjct 170682 TCTGTCTGAGCCTCAAGAATAGCATACCA 170654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629814498148320