Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq330 136 5e-27 seq210 127 3e-24 >seq330 Length=277972 Score = 136 bits (150), Expect = 5e-27 Identities = 469/725 (65%), Gaps = 10/725 (1%) Strand=Plus/Minus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 ||||| || ||||| | |||| | ||| ||||| |||| || || | | || | Sbjct 170532 TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTC 170473 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| || ||||| ||||| || | || ||| |||||||||| | || Sbjct 170472 CAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAAC 170413 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | || | | ||| |||||| ||||| || || ||||| | ||| | | | Sbjct 170412 AGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAA 170353 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||||| ||||| || || | ||| || || | | | || || || ||||| || || Sbjct 170352 ACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCT 170293 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||| | |||||| || ||||| || | |||| | ||| |||| ||| |||||||| Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGACC 66340 | ||||||||||| | || ||| ||| | || ||||| | | || | || || Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCC 170174 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || || || | || || || | || || || || ||||||||||| || || Sbjct 170173 AATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTC 170114 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 ||||| || || |||| | | | ||||| | || || | ||| || Sbjct 170113 AATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCC 170054 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 66520 ||||| || | || || || || || || || |||| | ||| | | | || || Sbjct 170053 GGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGT 169994 Query 66521 CTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATG 66578 |||||| || || |||| ||||| ||| ||||| || || || | ||| |||||| Sbjct 169993 CTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATG 169936 Query 66579 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 66638 ||||| || | ||| | | ||| || || | || ||| || || | ||| Sbjct 169935 TGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTT 169876 Query 66639 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 66696 || ||||| || | ||||| ||||| || || ||||| | || | ||||| || | Sbjct 169875 TTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCT 169818 Query 66697 TATCC 66701 |||| Sbjct 169817 CATCC 169813 >seq210 Length=376446 Score = 127 bits (140), Expect = 3e-24 Identities = 292/437 (67%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 || ||||| || || |||||||| ||||| || || || ||||| || || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||||||||||||||| ||| | || || | || | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 35987 AAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 36043 | | ||| || || || || ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 36044 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 36103 || ||||||||||| | | ||||| ||||||||||||| ||| || || || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 36104 ATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 36163 || | ||| || | | || || | | | || |||| ||| || || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGCA 39650 Query 36164 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 36223 || || ||| || ||||| || | | || | ||||||||||| || || || ||| Sbjct 39649 AAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGGC 39590 Query 36224 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 36283 || || || ||||| || | ||| || || ||||| || |||||||||||||| |||||| Sbjct 39589 ATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCCT 39530 Query 36284 TCTACTGCCGCAAAGGC 36300 || || |||||||| || Sbjct 39529 TCAACAGCCGCAAAAGC 39513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169558498960