Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq330 141 1e-28 seq210 111 2e-19 >seq330 Length=277972 Score = 141 bits (156), Expect = 1e-28 Identities = 581/903 (64%), Gaps = 20/903 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||| || ||||| | |||||| | | ||||| || | || || | | || | Sbjct 170532 TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTC 170473 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | || ||||| ||||| || | || ||| |||||||||| | || Sbjct 170472 CAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAAC 170413 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | | ||| ||||| ||||| || || ||||| | ||| | | | Sbjct 170412 AGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAA 170353 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | |||| ||||| || || | ||| || || | | | || ||||| ||||| || || Sbjct 170352 ACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCT 170293 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | |||||| || ||||| || | |||| | ||| |||| ||| |||||||| Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219 | ||||||||||| | || ||| ||| |||| ||||| | | || | || || Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCC 170174 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || || | || || || | || || || || ||||||||||| || || Sbjct 170173 AATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTC 170114 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 || || || | |||| | | | ||||| | || || | ||| || Sbjct 170113 AATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCC 170054 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||||| || | || || || || || || || |||| | ||||| | | || || Sbjct 170053 GGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGT 169994 Query 80400 CTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATG 80457 |||||| || ||| |||| ||||| ||| ||||| || || || | ||| |||||| Sbjct 169993 CTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATG 169936 Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517 ||||| || | ||| | | ||| ||| || | || ||| || || | ||| Sbjct 169935 TGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTT 169876 Query 80518 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 80575 || ||||| || | ||||| ||||| || || ||||| | || | ||||| || | Sbjct 169875 TTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCT 169818 Query 80576 TATCCTTATATTTGTTAACTACATCCAT-GGTGATACTTGAAATAATCGGAGAATGTTTC 80634 |||| | || | | || | ||| || | | || || ||||| | ||| Sbjct 169817 CATCCGCGTGCTTCATGA-TAGTTTCATATGTTTCATTGGATATCATCGGTGCTGGTTGA 169759 Query 80635 CCATTTTTAGGATTAACATAGTTGAATAAA--TCCTCCATCACTTCACT--AAATAGttt 80690 ||| || ||||||||||| | |||| | || || || || | |||| | || Sbjct 169758 TTATTCTTCGGATTAACATAAT--AATAGAGGTCTGAAATGAC--CAATGAAAATTGCTT 169703 Query 80691 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGG 80750 || || | |||||| ||||| || || ||||| | || || | ||| ||||| ||||| Sbjct 169702 CTTGGTCTGCTTGTGAAGATTGGAGACAGCTATGCGAGCTGCGAGAATAGCATAGTCTGG 169643 Query 80751 ATG 80753 || Sbjct 169642 GTG 169640 >seq210 Length=376446 Score = 111 bits (122), Expect = 2e-19 Identities = 295/447 (66%), Gaps = 14/447 (3%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 || ||||| || || |||||||| ||||| || || || || || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||||||||| || || ||||| || || | || | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 49789 AAT---CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 49845 | | ||| || || || || ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 49846 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 49905 || ||||||||||| | | ||||| ||||||||||| | || || || || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 49906 ATAGATCTAACGGTTTCTTCACT----CGGTGGATGCAATAAATGTTTAAACATCAAACA 49961 || | || || | | || |||| | || | | | |||| ||| || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAG----AACAACAAGCA 39654 Query 49962 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 50021 || || || ||| || ||||| || | | || || ||||||||||| || || || Sbjct 39653 AGCAAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACC 39594 Query 50022 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGAT 50081 ||||| || || ||||| || | ||| || || ||||| || || |||||||||||||| Sbjct 39593 TGGCATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGAT 39534 Query 50082 TCCTTCTACTGCGGCAAAGGCAACAAG 50108 |||||| || || ||||| || || || Sbjct 39533 TCCTTCAACAGCCGCAAAAGCGACGAG 39507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265262526160