Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq330 149 8e-31 seq210 140 4e-28 >seq330 Length=277972 Score = 149 bits (164), Expect = 8e-31 Identities = 536/825 (65%), Gaps = 20/825 (2%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||| ||||| || | || ||| |||||||||| | || || || | | ||| Sbjct 170454 ACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAACAGGTCACGAGCTCTGACT 170395 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| ||||| || || ||||| | ||| | | || |||| ||||| || Sbjct 170394 TCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAAACATCATCGTGCCAAGGC 170335 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| || || | | | || || || ||||| || || ||||| | |||||| || Sbjct 170334 TCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCTTGATCCACGTATCTCGCA 170275 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || | |||| | ||| |||| ||| |||||||| | ||||||||||| | Sbjct 170274 GTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAAGAGCCATTGGTCCCTGCA 170215 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGAT-AGACCTATTCCCCCTGCCATTTT 72320 || ||| ||| |||| ||||| | | | || | || || || || || || | || Sbjct 170214 ATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCCAATACCACCGGCAGTCTT 170156 Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 || || | || || || || ||||||||||| || || ||||| || || |||| Sbjct 170155 GGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTCAATACTGTCCGCCTTCAT 170096 Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440 | | | ||||| | || || | ||| || ||||| || | || || Sbjct 170095 ATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCCGGCATTGAACAGAGTCGG 170036 Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 72500 || || || || || |||| | ||||| | | || |||||||| || ||| || Sbjct 170035 TGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGTCTCAATGGCCTTTTCGAT 169976 Query 72501 ATCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558 || ||||| ||||||||| || || || | ||| ||||| ||||| || | ||| | Sbjct 169975 AT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATGTGCTGCGGGCGTTCGGCT 169918 Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618 | ||| ||| || | || ||| || || | ||||| ||||| || | ||| Sbjct 169917 ACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTTTTGAAACCGAAGAAATTG 169858 Query 72619 TA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAA 72676 || ||||| || || ||||| | || | || || || | |||| | || | | Sbjct 169857 TAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCTCATCCGCGTGCTTCATGA 169800 Query 72677 CTATATCCAT-GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735 || | ||| || | | || || ||||| | ||| ||| || ||||||||| Sbjct 169799 -TAGTTTCATATGTTTCATTGGATATCATCGGTGCTGGTTGATTATTCTTCGGATTAACA 169741 Query 72736 TAGTTGAATAAA--TCCTCCATCACTTCACT--AAATAGtttttttGTTTCCTTGTGTAG 72791 || | |||| | || || || || | |||| | || || || | |||||| || Sbjct 169740 TAAT--AATAGAGGTCTGAAATGAC--CAATGAAAATTGCTTCTTGGTCTGCTTGTGAAG 169685 Query 72792 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||| || || ||||| | || || ||||| ||||| ||||| || Sbjct 169684 ATTGGAGACAGCTATGCGAGCTGCGAGAATAGCATAGTCTGGGTG 169640 Score = 116 bits (128), Expect = 5e-21 Identities = 355/543 (65%), Gaps = 7/543 (1%) Strand=Plus/Minus Query 70786 TTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTAC 70845 || |||| |||| ||| ||||| || |||| || ||||| | || || || |||||| Sbjct 171756 TTCTCCTGATCCACTGTGAACTGGATAGGAGCAGAGGCGGCCATAGTGCGGAGGTAGTAC 171697 Query 70846 ATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATA 70904 ||||| || || || || | |||| ||| ||| ||||| || || | |||| ||| Sbjct 171696 ATGCCAGTCTTCAGTCCCATTTTCCACCCGGCAAAGTGCATGCTGGTAATTTTGCCCATA 171637 Query 70905 GCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTC 70964 | |||| || || ||||| || | ||||| || || ||| | || |||||||| Sbjct 171636 G-TAGGCTCTTTCATATGAATGTTAAGAGACTGGGACTGGTCAATGTATGCACCCCTGTC 171578 Query 70965 TGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTT 71024 |||||||| | | ||| | || | ||| ||||| | || ||||| | || Sbjct 171577 AGCAGCCATCTGCAGGATGTTTCGCTGAGAAATCTCCCAGACGGTCTTATAGAGGGCTTT 171518 Query 71025 AATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATT 71081 || || | |||| || | ||||||||| ||| || || ||||| ||||| | ||| Sbjct 171517 GATGTCCGCAGGAATATTAGGAATATTCTGAACGGAGCCGCCTTCTGCGATAATGCGATT 171458 Query 71082 TTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAAC 71141 || || | ||| ||| | | ||| | | | || || || || || Sbjct 171457 CTTCATGTTGTCAGACCACAGTCCCAGATCGACGAGGTCCTTGAGAAGCCACGGGTTGAC 171398 Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||||||||||| |||| | || | |||| ||| || || || ||||| || | Sbjct 171397 GACTTGAAATTCGCCAGCAAGGACCCGGCGAGAGTAGATGTTCGAAGTGTACGGCTCGAA 171338 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 |||| || || | || || || ||| || |||||||| ||||||| | Sbjct 171337 GCACTCGTTGAAGCCAAGTATCTGGCTGGTACTTGCCGTAGGCATAGGAGCCACCAGCAA 171278 Query 71262 ACTATTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGAT 71320 ||||| | || ||| || ||| | ||| ||| |||| || || ||||| | ||| |||| Sbjct 171277 GCTATTGCGAACACCTTGTTGAGC-GATCTTAGCTTTGAGGGAATCCCAGTCCCAGAGAT 171219 Query 71321 CCG 71323 ||| Sbjct 171218 CCG 171216 >seq210 Length=376446 Score = 140 bits (154), Expect = 4e-28 Identities = 295/437 (68%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| || || |||||||| ||||| || || ||||| || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||||||||| || || ||||| || || | || | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 41894 AAT---CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 41950 | | ||| || | ||| || ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 41951 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 42010 || ||||||||||| | | ||||| ||||||||||||| ||| || || || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 42011 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 42070 || | ||| || | | || || | | | || |||| ||| || || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGCA 39650 Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130 || || ||| || |||||||| | | || | ||||||||||| || || || ||| Sbjct 39649 AAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGGC 39590 Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCT 42190 || || || ||||| || | ||| || |||||||| || ||||||||||||||||||||| Sbjct 39589 ATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCCT 39530 Query 42191 TCTACTGCCGCAAAGGC 42207 || || |||||||| || Sbjct 39529 TCAACAGCCGCAAAAGC 39513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135894639440