Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq210 122 1e-22 seq33 96.9 5e-15 seq330 87.8 3e-12 >seq210 Length=376446 Score = 122 bits (134), Expect = 1e-22 Identities = 197/281 (70%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||||||||||||||| | ||| || | || || Sbjct 39038 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTTTGGACAGCCGAGGAAATTGACTTG 39097 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | ||| | | || ||||| | || || || Sbjct 39098 TCCAAGGACCTTCACGACTGGCACAATCGCCTTAACGATGACGAGCGCTACTTCATTTCC 39157 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| | | ||||||||||| | |||||| ||||| ||||| || || || || || Sbjct 39158 CACGTCCTCGCCTTCTTTGCTGCCTCCGACGGAATTGTCAATGAGAACCTCGTGGAGCGT 39217 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| | ||||| || | ||| ||||| || |||||||| |||||||| Sbjct 39218 TTCAGCGGCGAGGTTCAGATTCCTGAAG-CTCGTTGCTTCTATGGATTCCAGATCATGAT 39276 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 ||||| | ||||| || | || ||| || || |||| Sbjct 39277 CGAGAATATCCACTCCGAGACATATTCTCTCCTCATCGACA 39317 Score = 120 bits (132), Expect = 5e-22 Identities = 327/493 (66%), Gaps = 17/493 (3%) Strand=Plus/Plus Query 125366 TAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGA-CGACAAGTCTTCGTACGCCGACA 125424 ||| |||||| | |||| || || |||||| | || || || || | | ||| | Sbjct 39446 TAAGAAGGCTAACTGGGCCATCCGCTGGATCCAGGATCGGGAA-TCGACCTTCGCTCAGC 39504 Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 | || || || || || || || || || ||||||||||| || || ||| | |||| Sbjct 39505 GCCTCGTCGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGATCCTTCGCGTCTATCT 39564 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTC 125544 | ||| | ||||||||||| || ||||| || || || |||||| | || |||| Sbjct 39565 TCTGGTTGAAGAAGCGCGGTCTGATGCCAGGTCTTACTTTTTCCAACGAGCTGATCTCTC 39624 Query 125545 GAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCG 125604 | || |||||||| ||| |||||||| | | || |||| | ||| | | | Sbjct 39625 GTGATGAGGGCCTCCACACTGACTTTG-CTTGCT--TGTT-----GTTCTCT-CACCTCA 39675 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 | | | ||||| | | | ||| ||||| | || || || || || |||| Sbjct 39676 ACAACCGCCCCAGCAAGCAGACGGTACAAAACATCATTACTGAGGCTGTCGCTATTGAAC 39735 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 |||||||||| | || | || || || | | |||||||||| ||||| |||| Sbjct 39736 AAGAGTTTCTGTCAGATGCTCTTCCAGTGGCGCTCCTCGGCATGAACTCTAAGCTCATGT 39795 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGA 125781 || |||| || ||||| || || |||||||| ||| | | |||| | ||||| Sbjct 39796 GCCAGTATATCGAGTTCGTTGCTGATCGTCTTCTG---GTTTCTCTTGGTAACGGCAAGT 39852 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 ||| | ||| || || || ||||||||| || ||| || | |||||||||| Sbjct 39853 ACTACCATTCCACCAACCCATTCGATTTCATGGACAACATCTCCTTGTCCGGTAAGACCA 39912 Query 125842 ACTTTTTCGAGAA 125854 |||| |||||||| Sbjct 39913 ACTTCTTCGAGAA 39925 >seq33 Length=722644 Score = 96.9 bits (106), Expect = 5e-15 Identities = 165/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 70056 ACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCA 70115 |||| ||| ||||||||||| || |||||||| ||||||||||| || | ||| | Sbjct 507903 ACAGGGAAGTCGGCGATCTGGGTCCCGTGTACGGGTTCCAGTGGAGACATTTTGGCGCTG 507962 Query 70116 AGTATGTAGACTGC-GAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATC 70174 ||||||| || ||| ||||||| ||||| |||||||| || ||||| |||| | Sbjct 507963 AGTATGTTGA-TGCTAAGACAGATTATTCCGGTCAGGGCGTCGATCAGTTGCGCGAGGTT 508021 Query 70175 ATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCT 70234 | || | | | ||||||| ||||||||||| | || | | |||||||| Sbjct 508022 GTCCGCAAGTTGATGGCCAATCCGTTCGATAGGAGGATTATCCTGAGTGCTTGGAATCCA 508081 Query 70235 GCAGATTTGCACCAAATGGCACTACCACCGTGTCA-CTGTTTGGCTCAGTTTTA 70287 || ||| | | ||||| || || || ||||| ||||| || |||||||| Sbjct 508082 GCGGATATCGGGAAGATGGCGCTGCCGCCTTGTCATATGTTT-GCGCAGTTTTA 508134 >seq330 Length=277972 Score = 87.8 bits (96), Expect = 3e-12 Identities = 173/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| || || ||||| || || ||||||||| | || ||||| | || |||| Sbjct 170280 GATACGTGGATCAAGGTGGCAACAAGCGACCAGGCGCTTTTGCTATCTACCTCGAGCCTT 170339 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 |||||| || ||||| || || | || | || |||||| || || || | Sbjct 170340 GGCACGATGATGTTTTCGAATTCTTAGATCTCCGGAAAAACCACGGAAAGGAGGAAGTCA 170399 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 |||| | ||| |||| | || || ||| || || |||||||||||||| ||| | Sbjct 170400 GAGCTCGTGACCTGTTCTTCGCTCTTTGGACTCCGGACTTGTTCATGAAGCGAGTCGAGA 170459 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | ||| |||||| || | |||||| | | |||| |||||| ||||| || | Sbjct 170460 CCAACGGCGACTGGACGCTTTTCTGCCCCAATGAGGCACCTGGTCTGGCCGATGTCTACG 170519 Query 97105 GCGAAGAGTTTGAGGC 97120 | || || || ||||| Sbjct 170520 GAGATGAATTCGAGGC 170535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055550283440