Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq111 120 7e-22 seq210 91.5 3e-13 seq99 89.7 1e-12 >seq111 Length=1301451 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || || || | || || ||||| || ||||| |||||| Sbjct 1269632 ATTCCACCGCGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCA 1269573 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || || ||||| || ||||| || ||||| || | || || ||||| Sbjct 1269572 GACAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGC 1269513 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || |||||||||||||| | || || || || | || || || ||| Sbjct 1269512 GGAATTCCCTCCTTATCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCAGAAGATTCG 1269453 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || |||||||| || || || || || || || ||||||||| Sbjct 1269452 ACTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCATT 1269402 Score = 107 bits (118), Expect = 4e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || |||||||| ||||| | ||| ||||| || || || || || || Sbjct 1269821 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCAAGCTGCTTCCCTGCGAAG 1269762 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| |||||||| || ||||| || || ||||||||||| | || ||||| Sbjct 1269761 ATGAGACGCTGCTGATCAGGTGGAATTCCCTCCTTGTCCTGAATCTTCGTCTTCACATTG 1269702 Query 104489 TCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||| || || | || || || | || || ||||| || || || || || || Sbjct 1269701 TCAATGGTGTC-TGAGCTCTCAACTTCCAAGGTGATCGTCTTCCCGGTCAGAGTCTTGAC 1269643 Query 104548 AAATATCTGCATT 104560 || ||||||||| Sbjct 1269642 GAAGATCTGCATT 1269630 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || ||||| | || ||||| ||||| || || ||||| Sbjct 1269404 ATTCCACCACGGAGACGCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCG 1269345 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || || || ||||| || ||||| || || | | ||| || || || Sbjct 1269344 GACAAGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGG 1269285 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || ||||||||||| | || ||||| || | |||||||| | || Sbjct 1269284 GGGATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTATCGCTCGACTCA 1269225 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 ||||| ||||| || ||||| ||||| || || || || Sbjct 1269224 ACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 1269187 >seq210 Length=376446 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || |||||||| ||||| ||||| || |||||||| || || || || ||||||| ||| Sbjct 39510 GTCGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGATCCTTCGCGTCTATCTTCTGG 39569 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGAT 269247 |||||||| | || || |||||||| | ||||| || ||||| |||| Sbjct 39570 TTGAAGAAGCGCGGTCTGATGCCAGGTCTTACTTTTTCCAACGAGCTGAT 39619 >seq99 Length=529637 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||| || || ||||| || || | || || || || || || ||||| || || Sbjct 392670 TTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGATC 392729 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 | | ||| || || || || || ||||| |||||||| ||||| | || || || || Sbjct 392730 AAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 392789 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | ||| ||||| | ||| || || || |||||||||||||| || || || || || || Sbjct 392790 ATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACGAA 392848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392587596952