Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq330 118 1e-21 seq210 118 1e-21 >seq330 Length=277972 Score = 118 bits (130), Expect = 1e-21 Identities = 576/903 (64%), Gaps = 20/903 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||| || ||||| | |||| | ||| ||||| |||| || || | | || | Sbjct 170532 TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTC 170473 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| || ||||| ||||| || | || ||| |||||||||| | || Sbjct 170472 CAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAAC 170413 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | | ||| |||||| ||||| || || ||||| | ||| | | | Sbjct 170412 AGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAA 170353 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | |||| ||||| || || | ||| || || | | | || || || ||||| || || Sbjct 170352 ACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCT 170293 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||| | |||||| || ||||| || | |||| | ||| |||| ||| || || || Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATA-GACC 63496 |||||||| || | || ||| ||| |||| ||||| | | || || | || Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCC 170174 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || | || || || | || || || || || ||||||||||| || Sbjct 170173 AATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTC 170114 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 || || || | |||| | | | ||||| | || || | ||| || Sbjct 170113 AATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCC 170054 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 ||||| || | || || || || || || || |||| | ||| | | | || || Sbjct 170053 GGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGT 169994 Query 63677 CTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATG 63734 |||||| || || |||| ||||| ||| ||||| || || || | ||| |||||| Sbjct 169993 CTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATG 169936 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 ||||| || | ||| | | ||| || || | || ||| || || | ||| Sbjct 169935 TGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTT 169876 Query 63795 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63852 || ||||| || | ||||| ||||| || || ||||| | || | ||||| || | Sbjct 169875 TTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCT 169818 Query 63853 TATCCTTATATTTGTTAACTATATCCAT-GGTGATACTTGAAATAATCGGAGAATGTTTC 63911 |||| | || | | || | ||| || | | || || ||||| | ||| Sbjct 169817 CATCCGCGTGCTTCATGA-TAGTTTCATATGTTTCATTGGATATCATCGGTGCTGGTTGA 169759 Query 63912 CCATTTTTAGGATTAACATAGTTGAATAAA--TCCTCCATCACTTCACT--AAATAGttt 63967 ||| || ||||||||||| | |||| | || || || || | |||| | || Sbjct 169758 TTATTCTTCGGATTAACATAAT--AATAGAGGTCTGAAATGAC--CAATGAAAATTGCTT 169703 Query 63968 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64027 || || | |||||| ||||| || || ||||| | || || ||||| ||||| || || Sbjct 169702 CTTGGTCTGCTTGTGAAGATTGGAGACAGCTATGCGAGCTGCGAGAATAGCATAGTCTGG 169643 Query 64028 ATG 64030 || Sbjct 169642 GTG 169640 Score = 113 bits (124), Expect = 6e-20 Identities = 692/1109 (62%), Gaps = 21/1109 (2%) Strand=Plus/Minus Query 61980 TTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTAC 62039 || |||| |||| |||||| || || ||||| || |||| | || || || |||||| Sbjct 171756 TTCTCCTGATCCACTGTGAACTGGATAGGAGCAGAGGCGGCCATAGTGCGGAGGTAGTAC 171697 Query 62040 ATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAA 62099 || || || || || || | |||| ||| ||| ||||| || || | |||| | Sbjct 171696 ATGCCAGTCTTCAGTCCCATTTTCCACCCGGCAAAGTGCATGCTGGTAATTTTGCCCATA 171637 Query 62100 CTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCT 62159 | || ||| ||||| || || | ||| || || || ||| | || |||||||| Sbjct 171636 GTAGGCTCTTTCATATGAATGTTAAGAGACTGGGACTGGTCAATGTATGCACCCCTGTCA 171577 Query 62160 GCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTA 62219 |||||||| | | ||| | || | ||| ||||| | || ||||| | || Sbjct 171576 GCAGCCATCTGCAGGATGTTTCGCTGAGAAATCTCCCAGACGGTCTTATAGAGGGCTTTG 171517 Query 62220 ATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62276 || || | |||| || | ||||||||| ||| || || ||||| ||||| | |||| Sbjct 171516 ATGTCCGCAGGAATATTAGGAATATTCTGAACGGAGCCGCCTTCTGCGATAATGCGATTC 171457 Query 62277 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 62336 || || | ||| ||| | | ||| | | | || || ||| || || Sbjct 171456 TTCATGTTGTCAGACCACAGTCCCAGATCGACGAGGTCCTTGAGAAGCCACGGGTTGACG 171397 Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 ||||||||||| |||| | || | |||| ||| || || || ||||| || | Sbjct 171396 ACTTGAAATTCGCCAGCAAGGACCCGGCGAGAGTAGATGTTCGAAGTGTACGGCTCGAAG 171337 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 |||| || || | || || || ||| || |||||||| ||||||| || Sbjct 171336 CACTCGTTGAAGCCAAGTATCTGGCTGGTACTTGCCGTAGGCATAGGAGCCACCAGCAAG 171277 Query 62457 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62516 ||||| | || ||| | | ||| ||| |||| || | ||||| | ||| |||||| Sbjct 171276 CTATTGCGAACACCTTGTTGAGCGATCTTAGCTTTGAGGGAATCCCAGTCCCAGAGATCC 171217 Query 62517 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTAC----GATCC 62572 | ||| || || || || |||| || || || Sbjct 171216 GTAGGTGTCCTGTCCCACATGTCGTACTGGAGGATCCC----CTGGGAGACAGGGGAGCC 171161 Query 62573 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 62632 |||| || ||||| || | || || || || || || || | ||| | Sbjct 171160 CTCATACGTTGAATATGGCCCGTACTCCTTCGCGAGATCGGAAGATGCAGTCAGGGCAGC 171101 Query 62633 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA-TCAAATG 62691 || ||| || || |||||||||| | || || | | || || | | | ||||| | Sbjct 171100 GTGATAGATCGTCTCGAAGATCTGAATGTTCAGCTGCTTCGCCTCG-GCCGAGTCAAACG 171042 Query 62692 GATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62751 | || || ||||| || || | || | |||||||| | ||||| | || Sbjct 171041 GCAGGCGTAGCGCAAGGAACGCATCAGCAAGACCATTAACACCAAGGGCAATAGGGCGAT 170982 Query 62752 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 62811 | | ||| | | | || || || | |||||| || |||||||| | || || | Sbjct 170981 GGCGAAGGTTACTGTTCTGCGCCTCGGGCACAGGATAGTAGTTAATATCAACGATCTTGT 170922 Query 62812 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT-CGCC-- 62868 | || || | || | || | ||||| || | |||| | |||||| || |||| Sbjct 170921 TCAGGTTCCGAACGAGGACCTGCACCACTTCATGCAGTCTTCCGAAATCATATTCGCCAC 170862 Query 62869 ---CATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62925 || | |||||| | | ||||| |||||||| ||||| || ||||| || | Sbjct 170861 GAGCAGCATCAACAAACGTAGGGAGGGCAAGAGATGCCAAGTTACAGACAGCTACTTCGT 170802 Query 62926 TAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 62984 | | | ||| |||| || ||||||||||| || || | ||||||||| | | Sbjct 170801 CCGGAGC-GCAGTATTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATAGTTCCGAGA 170743 Query 62985 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63044 || | || || ||||| |||| || | |||||||| | ||||| ||| | |||||| Sbjct 170742 TTCTTCTGGTTGCTCTTCCTGTTGCAAGAGTCCTTATACAACATGAAGGGATTTCCAGTT 170683 Query 63045 TCAATCTGAGATTCTATAATCGCTTTCCA 63073 || |||||| || | ||| || | ||| Sbjct 170682 TCTGTCTGAGCCTCAAGAATAGCATACCA 170654 >seq210 Length=376446 Score = 118 bits (130), Expect = 1e-21 Identities = 293/441 (66%), Gaps = 14/441 (3%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| || || |||||||| ||||| || || || || || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||||||||| || || ||||| || || | || | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 33133 AAT---CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 33189 | | ||| || ||||| || ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249 || ||||||||||| | | ||||| ||||||||||| | || || || || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 33250 ATAGATCTAACGGTTTCTTCACT----CGGTGGATGCAATAAATGTTTAAACATCAAACA 33305 || | || || | | || |||| | || | | | |||| ||| || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAG----AACAACAAGCA 39654 Query 33306 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 33365 || || || ||| || ||||| || | | || || ||||||||||| || || || Sbjct 39653 AGCAAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACC 39594 Query 33366 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGAT 33425 ||||| || || ||||| || | ||| || || || ||||| ||||||||||||||||| Sbjct 39593 TGGCATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGAT 39534 Query 33426 TCCTTCTACTGCAGCAAAGGC 33446 |||||| || || ||||| || Sbjct 39533 TCCTTCAACAGCCGCAAAAGC 39513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944131985040