Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq30 140 2e-28 seq66 98.7 7e-16 seq111 87.8 1e-12 >seq30 Length=7579 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1031 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1090 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1091 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1125 >seq66 Length=597928 Score = 98.7 bits (108), Expect = 7e-16 Identities = 194/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||||||||| ||| |||| | | ||| | ||||| ||||| || || || Sbjct 379274 TTCTACCGCTACAAGATGGAGCGCTTGCAGTCGAAGATTGAGGGCAAGGGCAATGGCATC 379215 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || ||||||||||||||| || | |||||| | | ||||| || || | | ||| Sbjct 379214 AAGACCGTCATTGTCAACCTGAATTCGGTCGCTCAATCTCTCGGTCGTCCCCCGGCTTAC 379155 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | ||||| || || | |||||||| || ||| | | | | | || | || Sbjct 379154 GTCATCAAATACTTTGGATTTGAACTTGGTGCCCAGGCTAATGCTAAGCCCACTGATGAT 379095 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| || | ||||| | ||| | | ||||||| ||||||| || ||||| || Sbjct 379094 CGCTGGATTATCAACGGCGCCCATGATGCCCCCAAGCTTCAGGACTACCTGGACGGGTTC 379035 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || || |||||| || || | | ||| | |||||||||||||| Sbjct 379034 ATCTCCAGGTTTGTTCTTTGCAAGAAGTGCAAAAACCCGGAGACCGA 378988 >seq111 Length=1301451 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||| ||||||||||| || || ||||| ||||| | | || | || || | || Sbjct 1269833 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCAAGCTGC 1269774 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || || || || ||||| | || | || || |||||| ||| || Sbjct 1269773 TTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGGAATTCCCTCCTTGTCCTGAATCTTC 1269714 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||||||| | | || ||| || |||||||| || || || || || || ||| Sbjct 1269713 GTCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAAGGTGATCGTCTTCCCGGTC 1269654 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| |||||||| Sbjct 1269653 AGAGTCTTGACGAAGATCTGCAT 1269631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945591625414