Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq330 149 8e-31 seq210 131 2e-25 >seq330 Length=277972 Score = 149 bits (164), Expect = 8e-31 Identities = 472/725 (65%), Gaps = 10/725 (1%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||| || ||||| | |||| | |||| ||||| |||| || || | | || | Sbjct 170532 TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTC 170473 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| || ||||| ||||| || | || ||| |||||||||| | || Sbjct 170472 CAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAAC 170413 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | | ||| |||||| ||||| || || ||||| | ||| | | | Sbjct 170412 AGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAA 170353 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | |||| ||||| || || | ||| || || | | | || || || ||||| || || Sbjct 170352 ACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCT 170293 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 ||||| | |||||| || ||||| || | |||| | ||| |||| ||| |||||||| Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63351 | ||||||||||||| || ||| ||| |||| ||||| | | || | || || Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCC 170174 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || | || || || | || || || || ||||||||||| || || Sbjct 170173 AATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTC 170114 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 ||||| || || |||| | | | ||||| | || || | ||| || Sbjct 170113 AATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCC 170054 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531 ||||| || | || || || || || || || |||| | ||| | | | || || Sbjct 170053 GGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGT 169994 Query 63532 CTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATG 63589 |||||| || || |||| ||||| ||| ||||| || || || | ||| |||||| Sbjct 169993 CTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATG 169936 Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649 ||||| || | ||| | | ||| || || | || ||| || || | ||| Sbjct 169935 TGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTT 169876 Query 63650 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63707 || ||||| || | ||||| ||||| || || ||||| | || | ||||| || | Sbjct 169875 TTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCT 169818 Query 63708 TATCC 63712 |||| Sbjct 169817 CATCC 169813 >seq210 Length=376446 Score = 131 bits (144), Expect = 2e-25 Identities = 293/437 (67%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 || ||||| || || |||||||| ||||| || || || ||||| || || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||||||||||||||| ||||| || || | || | |||| ||||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAG--AGAAACC 39830 Query 32490 AAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 32546 | | ||| || || || || ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 32547 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 32606 || ||||||||||| | | ||||| ||||||||||||| ||| || || || || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 32607 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 || | ||| || | | || || | | | || |||| ||| || || Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGCA 39650 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 || || ||| || ||||| || | | || | ||||||||||| || || || ||| Sbjct 39649 AAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGGC 39590 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 || || || ||||| || | ||| || || ||||| || |||||||||||||| |||||| Sbjct 39589 ATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCCT 39530 Query 32787 TCTACTGCCGCAAAGGC 32803 || || |||||||| || Sbjct 39529 TCAACAGCCGCAAAAGC 39513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628879362400