Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07]
394 sequences; 29,074,643 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq111 104 3e-17
seq99 100 3e-16
>seq111
Length=1301451
Score = 104 bits (114), Expect = 3e-17
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||| ||||| |||||||| |||| ||| || || | || ||||||||||| || |||||
Sbjct 1269594 CTCTTTTTGGATATTGTAGTCAGACAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAA 1269535
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| || |||||||| | || | | |||||| ||| ||| | || || | |||
Sbjct 1269534 AATGAGACGTTGCTGGTCAGGCGGAATTCCCTCCTTATCC-TGAATCTTGGTCTTCACGT 1269476
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| ||||| || |||| ||||| || || ||||| || ||||| |
Sbjct 1269475 TGTCGATAGTGTCAGAAGATTCGACTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGA 1269416
Query 42196 CAAAGATTTGCATT 42209
| || || ||||||
Sbjct 1269415 CGAAAATCTGCATT 1269402
Score = 96.9 bits (106), Expect = 4e-15
Identities = 145/202 (72%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| |||| ||||| || | || || |||||||| ||
Sbjct 1269827 GTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCAAGCTGCTTCCCT 1269768
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 42130
||||| ||||| |||||||| || | ||| | | |||||||||| ||| | || || ||
Sbjct 1269767 GCGAAGATGAGACGCTGCTGATCAGGTGGAATTCCCTCCTTGTCC-TGAATCTTCGTCTT 1269709
Query 42131 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187
| | | | ||||| |||| || || || | ||||| || || || || ||
Sbjct 1269708 CACATTGTCAATGGTGTCTGAGCTC---TCAACTTCCAAGGTGATCGTCTTCCCGGTCAG 1269652
Query 42188 CGTCTTTACAAAGATTTGCATT 42209
||||| || ||||| ||||||
Sbjct 1269651 AGTCTTGACGAAGATCTGCATT 1269630
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | || || || | || || || ||||| ||||||||
Sbjct 1269365 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAG 1269306
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136
|| | ||||||||||||| || | | |||||||||| ||| | || || |||| |
Sbjct 1269305 ATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATT 1269247
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | || |||||||| || || || | |||||||| ||||| || || ||||| ||
Sbjct 1269246 GTCGATAGTATCGCTCGACTCAACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 1269187
>seq99
Length=529637
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || ||| ||||| | || || ||||||||||||||||| |
Sbjct 392668 CCTTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGA 392727
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| | ||||||||||| | || | || ||||| ||| ||| || |||| ||| |
Sbjct 392728 TCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 392786
Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | |||||||||||||| ||||||| || || || || ||||| || ||||| ||
Sbjct 392787 TCGATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACG 392846
Query 42198 AA 42199
||
Sbjct 392847 AA 392848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210124676960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |