Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq111 104 3e-17 seq99 100 3e-16 >seq111 Length=1301451 Score = 104 bits (114), Expect = 3e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| ||||| |||||||| |||| ||| || || | || ||||||||||| || ||||| Sbjct 1269594 CTCTTTTTGGATATTGTAGTCAGACAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAA 1269535 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| || |||||||| | || | | |||||| ||| ||| | || || | ||| Sbjct 1269534 AATGAGACGTTGCTGGTCAGGCGGAATTCCCTCCTTATCC-TGAATCTTGGTCTTCACGT 1269476 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||||| || |||| ||||| || || ||||| || ||||| | Sbjct 1269475 TGTCGATAGTGTCAGAAGATTCGACTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGA 1269416 Query 42196 CAAAGATTTGCATT 42209 | || || |||||| Sbjct 1269415 CGAAAATCTGCATT 1269402 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || ||||| |||| ||||| || | || || |||||||| || Sbjct 1269827 GTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCAAGCTGCTTCCCT 1269768 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 42130 ||||| ||||| |||||||| || | ||| | | |||||||||| ||| | || || || Sbjct 1269767 GCGAAGATGAGACGCTGCTGATCAGGTGGAATTCCCTCCTTGTCC-TGAATCTTCGTCTT 1269709 Query 42131 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 | | | | ||||| |||| || || || | ||||| || || || || || Sbjct 1269708 CACATTGTCAATGGTGTCTGAGCTC---TCAACTTCCAAGGTGATCGTCTTCCCGGTCAG 1269652 Query 42188 CGTCTTTACAAAGATTTGCATT 42209 ||||| || ||||| |||||| Sbjct 1269651 AGTCTTGACGAAGATCTGCATT 1269630 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | || || || | || || || ||||| |||||||| Sbjct 1269365 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAG 1269306 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || | ||||||||||||| || | | |||||||||| ||| | || || |||| | Sbjct 1269305 ATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATT 1269247 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || |||||||| || || || | |||||||| ||||| || || ||||| || Sbjct 1269246 GTCGATAGTATCGCTCGACTCAACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 1269187 >seq99 Length=529637 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| ||||| | || || ||||||||||||||||| | Sbjct 392668 CCTTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGA 392727 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | | ||||||||||| | || | || ||||| ||| ||| || |||| ||| | Sbjct 392728 TCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 392786 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||||||||||| ||||||| || || || || ||||| || ||||| || Sbjct 392787 TCGATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACG 392846 Query 42198 AA 42199 || Sbjct 392847 AA 392848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210124676960