Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq210 105 7e-18 seq99 93.3 4e-14 >seq210 Length=376446 Score = 105 bits (116), Expect = 7e-18 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || ||||| ||| | |||||| | | | || || || || | ||| || ||| Sbjct 39717 GAGGCTGTCGCTATTGAACAAGAGTTTCTGTCAGATGCTCTTCCAGTGGCGCTCCTCGGC 39776 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||| | || ||||||| |||| |||||||| || || |||||||| |||| Sbjct 39777 ATGAACTCTAAGCTCATGTGCCAGTATATCGAGTTCGTTGCTGATCGTCTTCTGGTTTCT 39836 Query 52734 CTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCG 52793 || || | ||||||| | | | ||| || || || || ||| ||||||| || Sbjct 39837 CTTGGTAACGGCAAGTACTACCATTCCACCAACCCATTCGATTTCATGGACAACATCTC- 39895 Query 52794 CTTGAG-GGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| || ||||||||||| |||||||| || || ||||| || Sbjct 39896 CTTGTCCGGTAAGACCAACTTCTTCGAGAAACGTGTTGGCGACTA 39940 >seq99 Length=529637 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || ||||| | ||| Sbjct 392668 CCTTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGA 392727 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | | |||||| |||||||| || || ||||| || || || | || || || | ||| Sbjct 392728 TCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATC-CTGGATCTTGGTCTTGACGTTG 392786 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| |||| || || |||| || | || ||||| ||||| || || || Sbjct 392787 -TCGATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCAC 392845 Query 138603 AAAA 138606 ||| Sbjct 392846 GAAA 392849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259955907680