Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq111 109 5e-19 >seq111 Length=1301451 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||| | ||| | || | || ||| || || || ||||| || Sbjct 1269858 TCCACCACGGAGTCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGA 1269799 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || ||||| || || ||| |||| | ||||||||||| || || Sbjct 1269798 AAGAGTGCGACCATCTTCAAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGG 1269739 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || ||| ||| | | || | |||||| | ||||| || Sbjct 1269738 AATTCCCTCCTTGTCCTGAATCTTCGTCTTCACATTGTCAATGGTGTCTGAGCTCTCAAC 1269679 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||| || ||||||||||| || || || |||||||| Sbjct 1269678 TTCCAAGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 1269631 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | ||| | || | || | || ||||||||||| |||||||| || Sbjct 1269630 TCCACCGCGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGA 1269571 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || ||| |||||||| ||||| ||| | || | || ||||| || || || Sbjct 1269570 CAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGG 1269511 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||| ||| || || ||| | ||||| ||| ||||| | | |||| Sbjct 1269510 AATTCCCTCCTTATCCTGAATCTTGGTCTTCACGTTGT-CGATAGTGTCAGAAGATTCGA 1269452 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| || | || || || || ||||| || || ||||||||||| Sbjct 1269451 CTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCAT 1269403 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||| || || || || || || ||| Sbjct 1269112 CCACCACGCAGACGGAGAACCAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCGGAG 1269053 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| ||||||||| ||||||| ||||||||||| ||||| Sbjct 1269052 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGA 1268993 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||||||| ||| || ||||| | |||| |||||| | |||||| Sbjct 1268992 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGACC 1268933 Query 127067 TCGACGGTCACCGTTTTGCCGGTCA 127091 || | || | || ||||| |||| Sbjct 1268932 TCCAAAGTGATGGTCTTGCCAGTCA 1268908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||| || | ||| | || || || || || || ||||| ||| Sbjct 1269402 TCCACCACGGAGACGCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 1269343 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| ||| || || || || |||||| ||||||| |||||||| ||||| || Sbjct 1269342 CAAGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGG 1269283 Query 127006 TATGCCCTCCTTGTCC 127021 || |||||||||||| Sbjct 1269282 GATACCCTCCTTGTCC 1269267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498458158560