Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq111 104 2e-17 seq330 91.5 1e-13 >seq111 Length=1301451 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| ||||| || | | || || || || || || || ||||||||||| || || Sbjct 1269632 ATTCCACCGCGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCA 1269573 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || ||||| ||| | || | ||||||||||| ||| Sbjct 1269572 GACAGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGC 1269513 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || ||||| ||||| || || | || | || | ||||| ||||| || Sbjct 1269512 GGAATTCCCTCCTTATCCTGAATCTTGGTCTTCA-CGTTGTCGATAGTGTCAGAAGATTC 1269454 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||||| | || || || || ||||| || || ||||| ||||| Sbjct 1269453 GACTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCAT 1269403 >seq330 Length=277972 Score = 91.5 bits (100), Expect = 1e-13 Identities = 301/461 (65%), Gaps = 13/461 (3%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||| |||||||| || || ||| | ||| | || || | || | || || Sbjct 169913 AAGGTAGCCGAACGCCCGCAGCACATGTTGATGAGAGTGGCCGTTGGAATACATGGCAAT 169972 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || |||||||| || | || || || | ||||||||||| |||| |||||| || || Sbjct 169973 GATATCGAAAAGGCCATTGAGACCTATCACTTGATGTCTCAGAAATATTTCACCCATGCC 170032 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || ||| ||||| |||||||| | |||||||| | |||||||| ||| || Sbjct 170033 TCACCGACTCTGTTCAATGCCGGCACTCCACAGGCTCAGTTGGCCTCGTGTTTCTTGGTC 170092 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || | ||||| || ||||||||||| || ||| ||| || ||||| Sbjct 170093 GATATGAAGGCGGACAGTATTGAAGGTATCTATGATACCTTGAAGACTTGTGCCATGATT 170152 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAG-GCCGC-GGAAGCC 123195 ||||| || ||| || || ||| | ||| | ||| || | | ||| | || | Sbjct 170153 TCCAAGACTGCCGGTGGTATTGGCCTTAACATCCAC--CGAATTCGCGCCACTGGTTCCT 170210 Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCC---GGGCTCGAATCCATGCTGCGAGTTTACA 123252 ||| | | ||| | || | | ||| || | | ||||||| ||||| | || Sbjct 170211 ACATTGCAGGGACCAATGG---CTCTTCCAATGGAATTGTTCCCATGCTCCGAGTATTCA 170267 Query 123253 ATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA-ACGCAA--AGGCGCGATGGCGATCT 123309 | ||| | | | | |||| || || || ||||| | || | |||||| | || |||| Sbjct 170268 ACAACACTGCGAGATACGTGGATCAAGGTGGCAACAAGCGACCAGGCGCTTTTGCTATCT 170327 Query 123310 ATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAAT 123350 | || || || ||||||| |||||| | ||| || ||| || Sbjct 170328 ACCTCGAGCCTTGGCACGATGATGTTTTCGAATTCTTAGAT 170368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000973884240