Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq111 168 2e-36 seq99 122 2e-22 seq44 91.5 3e-13 >seq111 Length=1301451 Score = 168 bits (186), Expect = 2e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||||||||| || || ||||| ||||||| |||||||||| || || Sbjct 1269623 CGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGACAGGGTA 1269564 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||||||||| |||||||| |||||||| || |||||| Sbjct 1269563 CGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGGAATTCCC 1269504 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||||| |||| ||||| | | ||| || || | Sbjct 1269503 TCCTTATCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCAGAAGATTCGACTTCGAGA 1269444 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||||||||| || || ||||| || Sbjct 1269443 GTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTG 1269406 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || ||||| || || |||||| |||| ||||||||||| | ||| Sbjct 1269851 CGGAGTCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTG 1269792 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || |||||||||||||||||||| || || |||||| Sbjct 1269791 CGACCATCTTCAAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGGAATTCCC 1269732 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| || | |||||||| | || || ||||| Sbjct 1269731 TCCTTGTCCTGAATCTTCGTCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAAG 1269672 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || ||||| || || || || || Sbjct 1269671 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTG 1269634 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| || |||||||| || ||||| |||| ||||||||| | ||| || Sbjct 1269395 CGGAGACGCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTG 1269336 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || ||||| || |||||||| | |||||||||||| || || || Sbjct 1269335 CGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCC 1269276 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| || || | | || || || | Sbjct 1269275 TCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTATCGCTCGACTCAACCTCAAGT 1269216 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || |||||||| || || Sbjct 1269215 GTGATGGTCTTGCCAGTGAGAGTCTTGAC 1269187 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| | ||| || ||||| |||| ||| ||||| | | ||| | || || Sbjct 1269097 AGAACCAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 1269038 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| |||||||| | |||||||| |||||| ||| ||||| ||| Sbjct 1269037 TCCAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 1268978 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || ||||| ||||| ||| Sbjct 1268977 TGGATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTC 1268918 Query 199598 TTACCCGT 199605 || || || Sbjct 1268917 TTGCCAGT 1268910 >seq99 Length=529637 Score = 122 bits (134), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || |||| |||||| || |||||||| || ||||||| Sbjct 392668 CCTTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGA 392727 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||||||||||||| || ||||| ||||| ||||| ||| ||| | Sbjct 392728 TCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGACGTTGT 392787 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | ||| ||||| | || || ||||||||||| || || ||||| | Sbjct 392788 CGATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACGA 392847 Query 199620 AA 199621 || Sbjct 392848 AA 392849 >seq44 Length=710769 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| |||||||||||||| |||| ||||||||| | | || Sbjct 242662 CGCAGGCGCAGCACGAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTG 242721 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || |||||||| || |||||||| || ||||||||||| || Sbjct 242722 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGG 242771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915648656398