Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq210 138 1e-27 seq44 102 8e-17 seq111 95.1 1e-14 seq99 82.4 8e-11 >seq210 Length=376446 Score = 138 bits (152), Expect = 1e-27 Identities = 196/275 (71%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || |||||||||||| ||||| | || ||||| | ||||| || ||| || || Sbjct 39321 TATGTGTCGATGAGGAGAGAATATGTCTCGGAGTGGATATTCTCGATCATGATCTGGAAT 39262 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 || || ||||| || || || | ||| || || ||||||||| || || || Sbjct 39261 CCATAGAAGCAACGAGCTTCAGGAATCTGAACCTCGCCGCTGAAACGCTCCACGAGGTTC 39202 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 || ||||| || |||||| ||| || || ||||| || ||||| ||||| | |||| Sbjct 39201 TCATTGACAATTCCGTCGGAGGCAGCAAAGAAGGCGAGGACGTGGGAAATGAAGTAGCGC 39142 Query 133348 TCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| ||||| | ||| | ||||||| | ||||||||||| ||| | |||||| Sbjct 39141 TCGTCATCGTTAAGGCGATTGTGCCAGTCGTGAAGGTCCTTGGACAAGTCAATTTCCTCG 39082 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | |||||||| || |||||||| || |||||||| Sbjct 39081 GCTGTCCAAAAGGAGGCCTCGGCCTTCTTGTACAT 39047 Score = 107 bits (118), Expect = 2e-18 Identities = 331/503 (66%), Gaps = 12/503 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || |||||| || || || || || || |||||| ||| Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTG--GTGCCGATCAGGTCGACGA 132721 ||| ||||| || ||||||| | | ||||| |||| || | | || || | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAGTACTTGCCGTTACCAAGAGAA--ACCA 39829 Query 132722 GCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGC 132780 | || | || || ||||||||||| || || ||||| | || | | || | || || Sbjct 39828 GAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAG-AGTTCATGCCGAGG 39770 Query 132781 AGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840 || ||| || || || || | ||||| ||| || || ||||| || || || | | Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 132841 AT-TTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 || || || || || ||| || || | | || ||||| ||||||||| Sbjct 39709 ATGTTTTGTACCGTCTGCTT-GCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGC 39651 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||| || | |||||| || | || || || |||||| ||||| | || || Sbjct 39650 AAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGG 39591 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| || ||||| || || | ||| || || | ||||| || |||||||||| || Sbjct 39590 CATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCC 39531 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT--CTTTGCTGGCGATC 133077 || || ||||| ||||| || ||||||| |||| || | || | | ||| |||| Sbjct 39530 TTCAACAGCCGCAAAAGCGACGAGGCGCTGAGCGAAGGTCGATTCCCGATCCTG--GATC 39473 Query 133078 CAGCGCAGCGCCCATTCGGCCTT 133100 ||||| | ||||| | ||||| Sbjct 39472 CAGCGGATGGCCCAGTTAGCCTT 39450 >seq44 Length=710769 Score = 102 bits (112), Expect = 8e-17 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 ||||| ||||| || |||||| ||||| ||||| || || | ||| ||||| ||||| || Sbjct 242789 GACAAGGAGGGCAT-CCCGCCTGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGA 242731 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||| ||||| ||| ||||||||||||||| ||||| |||| ||||| | ||||| Sbjct 242730 GGACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTCGTGCT 242671 Query 38456 GCG 38458 ||| Sbjct 242670 GCG 242668 >seq111 Length=1301451 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || ||||| ||||| |||||||| | || || ||| | | ||| | | Sbjct 1269185 TCGTCAAGACTCTCACTGGCAAGACCATCACACTTGAGGTTGAGTCGAGCGATACTATCG 1269244 Query 38314 A-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | || | | |||| || || | ||||| ||||| || ||| ||||||| ||||| | Sbjct 1269245 ACAATG--TCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTT 1269302 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| || || || || | |||||| | ||||||||||||||| || Sbjct 1269303 GATCTTCGCTGGCAAGCAACTTGAGGATGGCCGCACCTTGTCCGACTACAACATCCAGAA 1269362 Query 38432 GGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| | || || ||| | || |||||| Sbjct 1269363 GGAATCCACTCTCCATCTCGTCCTGCGT 1269390 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || |||||||| || || ||||| |||| ||||| | | Sbjct 1269402 AATGCAGATTTTCGTCAAGACTCTCACGGGGAAGACTATCACTCTCGAAGTCGAATCTTC 1269461 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | | |||| | |||| || || | || || ||||||||||| | ||| Sbjct 1269462 TGACACTATCGACAACG--TGAAGACCAAGATTCAGGATAAGGAGGGAATTCCGCCTGAC 1269519 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || ||||||| ||| || || ||||| || || | || ||||| |||||| Sbjct 1269520 CAGCAACGTCTCATTTTCGCCGGAAAGCAGCTAGAGGATGGCCGTACCCTGTCTGACTAC 1269579 Query 38421 AACATCCAAAAGGA 38434 || |||||||| || Sbjct 1269580 AATATCCAAAAAGA 1269593 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || || || || |||||| | || || ||| | | Sbjct 1269630 AATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCTTGGAAGTTGAGAGCTC 1269689 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | | | || | | |||| || || | ||||| ||||||||||| | || Sbjct 1269690 AGACACCATTGACAATG--TGAAGACGAAGATTCAGGACAAGGAGGGAATTCCACCTGAT 1269747 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| ||||| | ||| || || ||||| || || | ||||| || |||||| Sbjct 1269748 CAGCAGCGTCTCATCTTCGCAGGGAAGCAGCTTGAAGATGGTCGCACTCTTTCTGACTAC 1269807 Query 38421 AACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| ||| || || || | ||||| || Sbjct 1269808 AACATCCAGAAGGAGAGC-ACCCTTCACCTCGTGCTCCG 1269845 >seq99 Length=529637 Score = 82.4 bits (90), Expect = 8e-11 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || || || ||| |||| || || | | ||||| | | Sbjct 392848 TTCGTGAAGACCCTGACGGGTAAGACTATTACCCTCGATGTTGAATCGAGCGACACCATC 392789 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| || || || || || ||| | ||||| ||||| Sbjct 392788 GACAACG--TCAAGACCAAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGTT 392731 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | || ||||| | ||||||||||||||| | Sbjct 392730 TGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGGACCCTGAGCGACTACAACATCCAGA 392671 Query 38431 AGG 38433 ||| Sbjct 392670 AGG 392668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170336648960