Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq111 154 3e-32 seq99 109 1e-18 seq44 89.7 1e-12 >seq111 Length=1301451 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| ||| ||| || || || ||||| || | |||||| | |||||||| Sbjct 1269839 ACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCTTCA 1269780 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || || || || || || ||||| || || ||||| ||| Sbjct 1269779 AGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGGAATTCCCTCCTTGTCCTGA 1269720 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||||||||| || || || ||||| | ||| | |||||| Sbjct 1269719 ATCTTCGTCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAAGGTGATCGTCTTC 1269660 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||| ||| || ||||| | |||||| Sbjct 1269659 CCGGTCAGAGTCTTGACGAAGATCTGCATT 1269630 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||||||||| |||||||| || | || || | ||||| || Sbjct 1269611 ACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGACAGGGTACGGCCATCCTCT 1269552 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || ||||| ||||| || ||||| || || || || ||| Sbjct 1269551 AGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGGAATTCCCTCCTTATCCTGA 1269492 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| ||| ||| ||||| || || | ||||| Sbjct 1269491 ATCTTGGTCTTCACGTTGTCGATAGTGTCAGAAGATTCGACTTCGAGAGTGATAGTCTTC 1269432 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | ||| || ||||| | |||||| Sbjct 1269431 CCCGTGAGAGTCTTGACGAAAATCTGCATT 1269402 Score = 100 bits (110), Expect = 6e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | ||| || || || || || || || |||| ||||| | || || || Sbjct 1269095 AACCAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCCTC 1269036 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| | || || || || |||||||||||||| ||||| || Sbjct 1269035 CAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 1268976 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || |||||||| Sbjct 1268975 GATCTTGGTCTTGACGTTATCGATGGTGTC 1268946 >seq99 Length=529637 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| |||||||||||||| |||||||| Sbjct 392670 TTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGATC 392729 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || || ||||| || || |||||||| || || || || || ||||||||| || Sbjct 392730 AAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 392789 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| ||| || || ||||||| ||||| || |||| || || ||| Sbjct 392790 ATGGTGTCGCTCGA---TTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACG 392846 Query 195130 AA 195131 || Sbjct 392847 AA 392848 >seq44 Length=710769 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| |||| || || | || || ||| Sbjct 242674 ACGAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCG 242733 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || || ||||| || |||||| Sbjct 242734 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCT 242790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109475999198198