Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq210 98.7 2e-14 seq330 89.7 8e-12 seq222 86.0 1e-10 >seq210 Length=376446 Score = 98.7 bits (108), Expect = 2e-14 Identities = 174/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||||| || || |||||| ||||||||||| || | Sbjct 39957 TGACACCTGCCTTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACA 39898 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||| ||||| | ||| ||||||| | |||||| ||| || || | Sbjct 39897 AGGAGATGTTGTCCATGAAATCGAATGGGTTGGTGGAATGGTAGTACTTGCCGTTACCAA 39838 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | || | || || || || || ||||| || || |||||||||||||| | ||||| Sbjct 39837 GAGAAACCAGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCA 39778 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGAC--AAACTCTTTCTCGATCTCGACGGC 794128 |||||| ||||||||| || || | | ||||| |||||||| || || |||| || Sbjct 39777 TGCCGAGGAGCGCCACTGGAAGAGCAT--CTGACAGAAACTCTTGTTCAATAGCGACAGC 39720 Query 794129 CTCGATGATGAT 794140 ||| | ||||| Sbjct 39719 CTCAGTAATGAT 39708 Score = 95.1 bits (104), Expect = 2e-13 Identities = 125/171 (73%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 796189 AGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAG 796248 ||||||||| || || |||||| ||| || || |||||||||||||| || ||| Sbjct 39207 AGGTTCTCATTGACAATTCCGTCGGAGGCAGCAAAGAAGGCGAGGACGTGGGAAATGAAG 39148 Query 796249 TGACGCTCGTCGTCGCTGAG-CGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACC 796305 | |||||||| ||| | || ||| | ||||| | ||| | | ||| | Sbjct 39147 TAGCGCTCGTCATCGTTAAGGCGATTGTGCCAGTCGTGAAGGTCCTTGGACAAGTCAATT 39088 Query 796306 TCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 |||||||| ||||||||||||||||||||||| |||||||| | ||| ||| Sbjct 39087 TCCTCGGCTGTCCAAAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGATC 39037 >seq330 Length=277972 Score = 89.7 bits (98), Expect = 8e-12 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || || || || | ||| |||| ||| || || ||||||||||| |||| || ||||| Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||| ||||| || || | ||||| || | |||||| | ||| | || ||| Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAATTCGGTGGATGTTAAGGCCA 170173 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | |||||| || | || || | |||| || || ||||| || || Sbjct 170172 ATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTCA 170113 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||| || | || || ||||| | || | | | |||||| Sbjct 170112 ATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCCG 170053 Query 2073781 GCATTGAAGAGCGTGGG 2073797 |||||||| || || || Sbjct 170052 GCATTGAACAGAGTCGG 170036 >seq222 Length=957904 Score = 86.0 bits (94), Expect = 1e-10 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| |||||||| ||||||| | || ||||| | || || ||||| || ||||| Sbjct 79525 GCCGCGAACTACCTAGACATCAGAGCTCTTCTCGACGTCGGCTGTAAGACGGTCGCCAAT 79466 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | ||||||||||| || |||||||| ||||| | ||||| ||||| Sbjct 79465 ATGATCAAGGGCAAATCTCCCGAGGAGATCCGTAGAACCTTCAACAT 79419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916204488422966