Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq330 149 9e-31 seq210 113 6e-20 >seq330 Length=277972 Score = 149 bits (164), Expect = 9e-31 Identities = 591/917 (64%), Gaps = 26/917 (3%) Strand=Plus/Minus Query 69505 GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGA 69564 ||| | |||| |||||||||||||| | ||||| ||| ||||| ||||| || Sbjct 170542 GTAGAGAGCC--TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGG 170485 Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAA 69624 || | | | ||| | | | || ||||| ||||| || | || ||| ||||| Sbjct 170484 CAGAAAAGCGTCCAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAA 170425 Query 69625 AGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCG 69684 ||||| | || || || | | ||| ||| || ||||| ||||| ||||| Sbjct 170424 AGAGCGAAGAACAGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCT 170365 Query 69685 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGT 69744 | || || | || |||| ||||| || || || || || || | | || ||||| Sbjct 170364 AAGAATTCGAAAACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGC 170305 Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 || || || || ||||| | |||||| |||||||| || | |||| ||||| |||| | Sbjct 170304 TTGTTGCCACCTTGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACA 170245 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 || ||||| || ||||| || || | ||| || || | |||||||| Sbjct 170244 ATTCCATTGGAAGAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAATTCGGTGG 170185 Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCA 69924 || || || || || || || | || || || | |||||| ||||| || ||| Sbjct 170184 ATGTTAAGGCCAATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCA 170125 Query 69925 TATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 69984 || ||||| || || || || | |||| | | | ||||| | || ||| Sbjct 170124 TAGATACCTTCAATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCC 170065 Query 69985 TGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGC 70044 ||| ||| || ||||| || | || || || || || ||||| |||| | ||| | | Sbjct 170064 TGTGGAGTGCCGGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATC 170005 Query 70045 AGATTGTATGTTTCAATAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACAC 70102 | | || || ||||| || ||| |||| || || ||| ||||| | || || | Sbjct 170004 AAGTGATAGGTCTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTC 169947 Query 70103 GCATCAACATATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATG 70159 ||||||||| ||||| || |||| ||||| || ||| || | |||||||| Sbjct 169946 TCATCAACATGTGCTGCGGGCGTTCGGCTACC---TTCCCATTGATCCGTAGCAGGTATG 169890 Query 70160 ATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAAT 70217 | || || ||||| || || || | ||||| ||||| || | ||||| | || Sbjct 169889 AGCGCTCAAGCGTTTTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGAT 169832 Query 70218 AACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGT-AGGTGAGATAA 70276 | || || || | |||| | || | | || | |||| | | || || | Sbjct 169831 CGCGGAGTTAAGCTCATCCGCGTGCTTCATGA-TAGTTTCATATGTTTCATTGGATATCA 169773 Query 70277 TCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAA--TCTTCCATTAC--A 70332 |||| | | ||| | ||| || ||||||||||| | |||| | ||| || || | Sbjct 169772 TCGGTGCTGGTTGATTATTCTTCGGATTAACATAAT--AATAGAGGTCTGAAATGACCAA 169715 Query 70333 TCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGA 70392 | | |||| | || || || | |||||| | ||| || | ||||| | ||||| ||| Sbjct 169714 TGA--AAATTGCTTCTTGGTCTGCTTGTGAAGATTGGAGACAGCTATGCGAGCTGCGAGA 169657 Query 70393 ATAGCATAGTCAGGATG 70409 ||||||||||| || || Sbjct 169656 ATAGCATAGTCTGGGTG 169640 >seq210 Length=376446 Score = 113 bits (124), Expect = 6e-20 Identities = 297/450 (66%), Gaps = 20/450 (4%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| || ||||| ||||||||||| || || || || || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAttttttt---ttAAATCCTAATTCTGAA 39442 ||||||||||| || || || || | || || | || ||| | || ||| Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAGTACTTGCCGTTA----CCAAGA--GAA 39833 Query 39443 ATCAAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCT 39499 | || | ||| ||||| || || || || ||| | | | | ||||| || Sbjct 39832 ACCAGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCG 39773 Query 39500 ATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTT 39559 | ||| ||||| ||||| || | |||||||||| ||| || | || ||||| || Sbjct 39772 AGGAGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTA 39713 Query 39560 ATTATCGATGTTACTACCTCATCACT----CGGTGGATGCAATAAATGTTTAAACATTAA 39615 || || | ||| || | || |||| | || | | | |||| || Sbjct 39712 ATGATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAG----AACAACAA 39657 Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || |||||| || ||||||||||| | | || | ||||| ||||| || || Sbjct 39656 GCAAGCAAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAG 39597 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||| ||||| || | ||| || || | || || |||||||||||||| Sbjct 39596 ACCTGGCATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAA 39537 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||| ||||| || || ||||| || || || Sbjct 39536 GATTCCTTCAACAGCCGCAAAAGCGACGAG 39507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905416974160