Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq111 122 7e-23 seq99 98.7 8e-16 seq330 87.8 2e-12 >seq111 Length=1301451 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || |||||||| ||||||||||| || | | || | || || ||||| || ||| Sbjct 1269599 GTGGACTCTTTTTGGATATTGTAGTCAGACAGGGTACGGCCATCCTCTAGCTGCTTTCCG 1269540 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||||||||| || || || ||||| | ||||| ||||| |||||| | ||| Sbjct 1269539 GCGAAAATGAGACGTTGCTGGTCAGGCGGAATTCCCTCCTTATCCTGAATCTTGGTCTTC 1269480 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | ||| ||||| ||||| |||| || ||||| ||||| Sbjct 1269479 ACGTTGTCGATAGTGTCAGAAGATTCGACTTCGAGAGTGATAGTCTTCCCCGTGAGAGTC 1269420 Query 27231 TTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 1269419 TTGACGAAAATCTGCAT 1269403 >seq99 Length=529637 Score = 98.7 bits (108), Expect = 8e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||||||| | | || | || |||||||| ||||| ||| | || Sbjct 392670 TTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGATC 392729 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 | |||||| || ||||| || | || || ||||| ||||||| | || | | | || Sbjct 392730 AAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 392789 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | |||||| || || || |||| || |||||||| || ||||| || Sbjct 392790 ATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACGAA 392848 >seq330 Length=277972 Score = 87.8 bits (96), Expect = 2e-12 Identities = 277/424 (65%), Gaps = 9/424 (2%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672 |||| || | |||| ||| ||||||| || ||||||||||| ||||| ||||| Sbjct 170489 TGGGGCAGAAAAGCGTCCAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAG 170430 Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTT--TTTCTCTTCTGTACCCATAAttttt-t 131729 ||| | ||| | ||||| || | |||| | ||| || || | || | ||||| Sbjct 170429 TCCAAAGAGCGAAGAACAGGTCACGAGCTCTGACTTC-CTCCTTT--CCGTGGTTTTTCC 170373 Query 131730 tCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGC 131789 | || ||| || || |||| || | ||||| || || | || | || | |||| Sbjct 170372 GGAGATCTAAGAATTCGAAAACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGC 170313 Query 131790 CTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACA 131846 || ||| || || ||||||| || | | | |||||||| |||| || | || Sbjct 170312 CTGGTCGCTTGTTGCCACCTTGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCA 170253 Query 131847 TGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGA 131906 |||| | | || |||| |||||||| | ||||||| ||| |||| | | Sbjct 170252 TGGGAACAATTCCATTGGAAGAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAA 170193 Query 131907 TTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTA 131966 || ||| | ||| || |||||||| ||| | || || || | || || | | | Sbjct 170192 TTCGGTGGATGTTAAGGCCAATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCA 170133 Query 131967 GAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACA 132026 || | |||||||||||| | |||||||| || ||||| || || || |||| || Sbjct 170132 AGGTATCATAGATACCTTCAATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCA 170073 Query 132027 ACTG 132030 |||| Sbjct 170072 ACTG 170069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932359518128