Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq210 104 3e-17 seq330 87.8 2e-12 >seq210 Length=376446 Score = 104 bits (114), Expect = 3e-17 Identities = 121/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || |||||| |||||||| || || || || || || || || |||||| Sbjct 39652 GCAAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCT 39593 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| ||||| |||||||||||||| | |||| ||| ||| || || || |||||||| Sbjct 39592 GGCATCAGACCGCGCTTCTTCAACCAGAAGATAGACGC-GAAGGATCCAGAAAAGAAGAT 39534 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || ||| |||||| || | ||||| | ||||||| Sbjct 39533 TCCTTCAACAGCCGCAAAAGCGACGAGGCGCTGAGCGAAGG 39493 >seq330 Length=277972 Score = 87.8 bits (96), Expect = 2e-12 Identities = 439/694 (63%), Gaps = 13/694 (2%) Strand=Plus/Minus Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524 ||||| |||||| || || || || || || | |||| ||||| ||||||| | Sbjct 170549 ACTTTTCGTAGAGAGCCTCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCAT 170490 Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 111584 || |||||||| | ||| | || ||| || ||||||||||| | ||| ||| Sbjct 170489 TGGGGCAGAAAAGCGTCCAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAG 170430 Query 111585 TCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 |||| || | | || || || | | | | || | || || | || ||||| || Sbjct 170429 TCCAAAGAGCGAAGAACAGGTCACGAGCTCTGA-CTTCCTCCTTTCCGTGGTTTTTCCGG 170371 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | || | ||| || | | ||| ||||||| ||||| || |||| || | || || Sbjct 170370 AGATCTAAGAATTCGAAAACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCC- 170312 Query 111704 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 | | ||| ||| |||||| || || | ||| ||| ||| ||||| || ||| Sbjct 170311 --TGGTCGCTTGTTGCCACCTTGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGC 170254 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 || |||| ||| |||| || ||||| ||||| ||| || | |||| | Sbjct 170253 ATGGGAACAATTCCATTGGAAGAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGA 170194 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | ||||||| | |||||||| || || ||| || || ||||| | | Sbjct 170193 ATTCGGTGGATGTTAAGGCCAATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTC 170134 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | || |||||||||| | || |||| |||| | ||| | ||| || || | Sbjct 170133 AAGGTATCATAGATACCTTCAATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCC 170074 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 | ||| | ||| || || |||||||| || || |||| || || |||| ||| | Sbjct 170073 AACTGAGCCTGTGGAGTGCCGGCATTGAACAGAGTCGGTGAGGCATGGGTGAA-ATATTT 170015 Query 111998 -TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 112056 || |||||| || || ||||| | | | || || || | || || || || | Sbjct 170014 CTGAGACATCAAGTGATAGGTCTCAATGGCCTTTTCGATATCATTGCCATGTATTCCAAC 169955 Query 112057 TGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAG 112116 || || | ||| ||||||| ||| ||| ||| | | |||| || |||| | || Sbjct 169954 GGCCACTCTCATCAACATGTGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAG 169895 Query 112117 ATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 112150 || |||||| ||||||| ||| ||| || Sbjct 169894 GTATGAGCGCTCAAGCGTTTTGAAACCGAAGAAA 169861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028906942400