Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq210 140 4e-28 seq330 116 4e-21 seq288 95.1 1e-14 >seq210 Length=376446 Score = 140 bits (154), Expect = 4e-28 Identities = 129/161 (80%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| ||| |||| ||| |||| |||||| |||||| || |||||||| ||||| |||| Sbjct 39493 CCTTCGCTCAGCGCCTCGTCGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGATCCT 39552 Query 94856 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || ||| |||| | ||| | |||||||| ||||| ||||||||||| || |||||| Sbjct 39553 TC-GCGTCTATCTTCTGGTTGAAGAAGCGCGGTCTGATGCCAGGTCTTACTTTTTCCAAC 39611 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||||||||| ||||| |||||| || ||||| Sbjct 39612 GAGCTGATCTCTCGTGATGAGGGCCTCCACACTGACTTTGC 39652 >seq330 Length=277972 Score = 116 bits (128), Expect = 4e-21 Identities = 406/628 (65%), Gaps = 13/628 (2%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||||| ||| | |||||| | || || ||||| | || || || | Sbjct 169927 CCCGCAGCACATGTTGATGAGAGTGGCCGTTGGAATACATGGCAATGATATCGAAAAGGC 169986 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | ||||| || || |||||| || | ||| |||| || || |||| || || | Sbjct 169987 CATTGAGACCTATCACTTGATGTCTCAGAAATAT-TTCACCCATGCCTCACCGACTCTGT 170045 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||| || || ||| | || || || || ||| | ||| | |||| || Sbjct 170046 TCAATGCCGGCACTCCACAGGCTCAGTTGGCCTCGTGTTTCTTGGTCGATATGAAGGCGG 170105 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||||| || | | | ||||| || || ||| || | Sbjct 170106 ACAGTATTGAAGGTATCTATGATACCTTGAAGACTTGTGCCATGATTTCCAAGACTGCCG 170165 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| | ||||||| | | |||| | || ||| ||||| | Sbjct 170166 GTGGTATTGGCCTTAACATCCACCGAATTCGCGCCACTGGTTCCTACATTGCAGGGACCA 170225 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 |||| || |||| ||| |||| ||||| || ||||| ||| ||| ||| | || | Sbjct 170226 ATGGCTCTTCCAATGGAATTGTTCCCATGCTCCGAGTATTCAACAACACTGCGAGATACG 170285 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | |||||| ||| ||| | | || || | || |||| || ||||| |||| Sbjct 170286 TGGATCAAGGTGGCAACAAGCGACCA---GGCGCTTTTGCTATCTACCTCGAGCCTTGGC 170342 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 ||| ||| | | || ||| | || | || ||||| || | ||||| | | | Sbjct 170343 ACGATGATGTTTTCGAATTCTTAGATCTCCGGAAAAACCACGGAAAGGAGGAAGT-CAGA 170401 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || || || || |||| |||||| |||| ||| || | ||||||||| |||| ||| Sbjct 170402 GCTCGTGACCTGTTCTTCGCTCTTTGGACTCCGGACTTGTTCATGAAGCGAGTCGAGACC 170461 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| | || || || || | ||||||||||||| |||||| | || Sbjct 170462 AACGGCGACTGGACGCTTTTCTGCCCCAATGAGGCACCTGGTCTGGCCGATGTCTACGGA 170521 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGT 104840 || || || || || || ||| ||||| Sbjct 170522 GATGAATTCGAGGCTCTCTACGAAAAGT 170549 >seq288 Length=302810 Score = 95.1 bits (104), Expect = 1e-14 Identities = 187/274 (68%), Gaps = 6/274 (2%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 || |||||||||||| ||||||| || ||| ||||| ||||| | | |||| ||| Sbjct 34928 AGGCCCTTGATGTGGCTCCCGTCGTGGTCCTGATCGGTCATAATCATCAAATGACCGTAC 34869 Query 169229 CGAAGCTCGGAAACATCT---TGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTG 169285 | |||| | | | | | || || ||||| ||||||||||| | || |||||| Sbjct 34868 CTAAGCCC--ACGCGTGTCAGTG-TACTCCTTCTTGTGTTGAAGACCTATGAAGTTCTTG 34812 Query 169286 AGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345 | || | || ||| |||||| || | ||| || || ||||| || || || | Sbjct 34811 ATATTCTGGATCTCCTGGTTTTTTGAAATCTGCTCGAACGATGCATCACGGACGTTAAGA 34752 Query 169346 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCG 169405 ||| || || ||||| |||||||| | ||||| | || || || | | || || Sbjct 34751 AGCTTTCCTCGTAGAGGAAAGACACCAAAATGATCCGGTCCGACAACCGCTCGCCCTGCC 34692 Query 169406 ACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGA 169439 | || ||| ||| ||||||||||| ||||||| Sbjct 34691 ATGGCCAGACCCTTGGCCGAGTCACCTTCGGTGA 34658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257927440560