Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq330 114 1e-20 seq210 111 2e-19 >seq330 Length=277972 Score = 114 bits (126), Expect = 1e-20 Identities = 385/597 (64%), Gaps = 2/597 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||| |||| || || || || |||||| | || || | | Sbjct 169928 CCGCAGCACATGTTGATGAGAGTGGCCGTTGGAATACATGGCAATGATATCGAAAAGGCC 169987 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| || || ||||| ||||| | ||||| || || | ||||| || ||| Sbjct 169988 ATTGAGACCTATCACTTGATGTCTCAGAAATATTTCACCCATGCCTCACCGACTCTGTTC 170047 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || ||||| || | | ||| || | |||||| | || | |||||||| ||| Sbjct 170048 AATGCCGGCACTCCACAGGCTCAGTTGGCCTCGTGTTTCTTGGTCGATATGAAGGCGGAC 170107 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 || ||||| || ||||| || || | ||| || || || |||||| |||| Sbjct 170108 AGTATTGAAGGTATCTATGATACCTTGAAGACTTGTGCCATGATTTCCAAGACTGCCGGT 170167 Query 19343 GGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 ||||| || | || | | | | || || | | |||| | || ||||| || Sbjct 170168 GGTATTGGCCTTAACATCCACCGA-ATTCGCGCCACTGGTTCCTACATTGCAGGGACCAA 170226 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || | || || || || |||||||| || ||||||||||| || || ||||| Sbjct 170227 TGGCTCTTCCAATGGAATTGTTCCCATGCTCCGAGTATTCAACAACACTGCGAGATACGT 170286 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | || || ||| ||| || ||| | || || |||||||||||||| ||||||| Sbjct 170287 GGATCAAGGTGGCAACAAGCGACCAGGCGCTTTTGCTATCTACCTCGAGCCTTGGCACGA 170346 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || || | || ||| | || || || ||||| || | ||||| | | ||| Sbjct 170347 TGATGTTTTCGAATTCTTAGATCTCCGGAAAAACCACGGAAAGGAGGAAGTCAGAGCTCG 170406 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 ||||| ||| || | |||| ||||||| | |||||| || || |||| ||| Sbjct 170407 TGACCTGTTCTTCGCTCTTTGGACTCCGGACTTGTTCATGAAGCGAGTCGAGACCAACGG 170466 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 || ||| || | ||||| | || ||||| || |||| |||||||| || Sbjct 170467 CGACTGGACGCTTTTCTGCCCCAATGAGGCACCTGGTCTGGCCGATGTCTACGGAGA 170523 Score = 93.3 bits (102), Expect = 5e-14 Identities = 392/614 (64%), Gaps = 4/614 (1%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || || |||||||||| ||| || || ||| | ||||| | || |||||| || Sbjct 170523 TCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTCCAGTCGCCG 170464 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | |||| || || |||||| | |||||| |||| || || ||| ||||| || Sbjct 170463 TTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAACAGGTCACGA 170404 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | | ||||| | || ||||| || || || | || || | | || || Sbjct 170403 GCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAAACATCATCG 170344 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || ||||| || || | || |||||| ||| || || | ||| Sbjct 170343 TGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCTTGATCCACG 170284 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || | || ||||||||||| |||||||||||||| || || || | || ||| || Sbjct 170283 TATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAAGAGCCATTG 170224 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664 ||||| || | ||| | || ||||| | | | | || | || || || || Sbjct 170223 GTCCCTGCAATGTAGGAACCAGTGGCGCGAAT-TCGGTGGATGTTAAGGCCAATACCACC 170165 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 || |||||| || || || ||| | || || ||||| || || || ||| Sbjct 170164 GGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTCAATACTGTC 170105 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 |||||||| |||||| ||| || | || ||| | | || ||||| ||||| Sbjct 170104 CGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCCGGCATTGAA 170045 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 || ||||| | || || ||||| | || || ||||| | || ||||| || | Sbjct 170044 CAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGTCTCAATGGC 169985 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCG 79903 || || | ||| || || || || || || | ||| || | || ||| ||||| Sbjct 169984 CTTTTCGATATCATTGCCATGTATTCCAACGGCCACTCTCATCAACATGTGCTGCGGGCG 169925 Query 79904 TCTCGCCGACATTC 79917 | ||| | || ||| Sbjct 169924 T-TCGGCTACCTTC 169912 >seq210 Length=376446 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 59973 tttGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || || || ||| | |||||||| || |||||||||||||| ||||| || ||| Sbjct 39495 TTCGCTCAGCGCCTCGTCGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGATCCTTC 39554 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 |||| |||||| | || ||||| || || ||||| || || | ||| ||||||||| Sbjct 39555 GCGTCTATCTTCTGGTTGAAGAAGCGCGGTCTGATGCCAGGTCTTACTTTTTCCAACGAG 39614 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||| || || || ||||||||||| Sbjct 39615 CTGATCTCTCGTGATGAGGGCCTCCA 39640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522098515360