Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq111 187 3e-42 seq210 170 2e-37 seq99 118 1e-21 seq44 98.7 1e-15 >seq111 Length=1301451 Score = 187 bits (206), Expect = 3e-42 Identities = 171/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || || |||||||| || || |||||||||||||| | |||| || | Sbjct 1269187 GTCAAGACTCTCACTGGCAAGACCATCACACTTGAGGTTGAGTCGAGCGATACTATCGAC 1269246 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || ||||||||||||||||| || || || |||||||||||| | || Sbjct 1269247 AATGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATC 1269306 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| |||||||| ||||||| || ||| | | ||||| || |||| |||||| Sbjct 1269307 TTCGCTGGCAAGCAACTTGAGGATGGCCGCACCTTGTCCGACTACAACATCCAGAAGGAA 1269366 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||| ||||| ||| ||||||| || |||||| Sbjct 1269367 TCCACTCTCCATCTCGTCCTGCGTCTCCGTGGTGGA 1269402 Score = 183 bits (202), Expect = 3e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || || || |||||||| ||||| || || || || Sbjct 1269402 AATGCAGATTTTCGTCAAGACTCTCACGGGGAAGACTATCACTCTCGAAGTCGAATCTTC 1269461 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | || ||||| | || |||||||| |||||||||||||| || ||||| Sbjct 1269462 TGACACTATCGACAACGTGAAGACCAAGATTCAGGATAAGGAGGGAATTCCGCCTGACCA 1269521 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| ||||| || || ||||| || ||||||| |||||||| | ||||| || Sbjct 1269522 GCAACGTCTCATTTTCGCCGGAAAGCAGCTAGAGGATGGCCGTACCCTGTCTGACTACAA 1269581 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||||| || ||||| ||||| || ||| | || |||||||||||| Sbjct 1269582 TATCCAAAAAGAGTCCACCCTTCACCTTGTCCTACGACTTCGCGGTGGA 1269630 Score = 154 bits (170), Expect = 2e-32 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || ||||| ||||| || || | || |||||| || Sbjct 1269630 AATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCTTGGAAGTTGAG--AGC 1269687 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||||| ||| ||||| | || ||||||||||||||||||||||| || || Sbjct 1269688 TCAGACACCATTGACAATGTGAAGACGAAGATTCAGGACAAGGAGGGAATTCCACCTGAT 1269747 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| || || |||| ||| || || | ||||| Sbjct 1269748 CAGCAGCGTCTCATCTTCGCAGGGAAGCAGCTTGAAGATGGTCGCACTCTTTCTGACTAC 1269807 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||| ||||| ||| ||||| || || | || || || |||||| Sbjct 1269808 AACATCCAGAAGGAGAGCACCCTTCACCTCGTGCTCCGACTCCGTGGTGGA 1269858 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || ||| | ||||| ||||| | || | ||| | || | ||| | Sbjct 1268910 ACTGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACCATCGATAACGTCAAGACC 1268969 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| || |||||||| || |||||||| | || || ||||| ||| Sbjct 1268970 AAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGAAAG 1269029 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | || || || | |||||||| |||| |||||||| ||| | || Sbjct 1269030 CAGCTGGAGGACGGCCGCACTCTCTCCGACTATAACATCCAGAAGGAATCTACTTTGCAC 1269089 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | || | ||||| || ||||| Sbjct 1269090 TTGGTTCTCCGTCTGCGTGGTGG 1269112 >seq210 Length=376446 Score = 170 bits (188), Expect = 2e-37 Identities = 163/208 (78%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 64661 CTAAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGC 64717 |||| |||||| | ||||||||||| ||||| | |||| | ||| | || | ||||| Sbjct 39445 CTAAGAAGGCTAACTGGGCCATCCGCTGGATCCAGGATCGGGAATCGACCTTCGCTCAGC 39504 Query 64718 GTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTT 64777 | |||| |||||||| ||| |||||||| ||||||||||| || ||| ||||| | Sbjct 39505 GCCTCGTCGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGATCCTTCGCGTCTATCT 39564 Query 64778 TCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTC 64837 ||||| | || ||||| || |||||||||||||| | ||||| |||||||||||||||| Sbjct 39565 TCTGGTTGAAGAAGCGCGGTCTGATGCCAGGTCTTACTTTTTCCAACGAGCTGATCTCTC 39624 Query 64838 GGGACGAGGGGCTCCACCAAGAATTTGC 64865 | || ||||| |||||| || ||||| Sbjct 39625 GTGATGAGGGCCTCCACACTGACTTTGC 39652 >seq99 Length=529637 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || || ||||||||||| || || ||||| || | || | ||| Sbjct 392848 TTCGTGAAGACCCTGACGGGTAAGACTATTACCCTCGATGTTGAATCGAGCGACACCATC 392789 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || ||||| ||||| || || || || |||||||||||| | Sbjct 392788 GACAACGTCAAGACCAAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTG 392729 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 392728 ATCTTCGCTGGTAAGCAGCTCGAGGATGGACGGACCCTGAGC-GACTACAACATCCAGAA 392670 Query 27594 GG 27595 || Sbjct 392669 GG 392668 >seq44 Length=710769 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || ||||||||||| || || || ||||| ||||| |||||| Sbjct 242789 GACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 242730 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | ||||| || |||| ||||| || ||||| || || || || Sbjct 242729 GACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACCTCGTGCTG 242670 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 242669 CGCCTGCGTGGTGG 242656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307591221280