Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq111 215 1e-50 seq99 127 5e-24 seq44 93.3 1e-13 seq330 89.7 1e-12 >seq111 Length=1301451 Score = 215 bits (238), Expect = 1e-50 Identities = 181/222 (82%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| ||||||||||||||| ||||||||||||||||| || || || | ||||| Sbjct 1269623 CGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGACAGGGTA 1269564 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || |||||||| || ||||| || || ||||| |||||||| |||| ||| Sbjct 1269563 CGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGGAATTCCC 1269504 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||| ||||| |||||||| ||||| |||||||| ||| || |||||| Sbjct 1269503 TCCTTATCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCAGAAGATTCGACTTCGAGA 1269444 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| |||||||||||||| || || | ||||||| Sbjct 1269443 GTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCATT 1269402 Score = 181 bits (200), Expect = 2e-40 Identities = 174/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| || || |||||||| ||| ||| || |||||||| || || | ||| || Sbjct 1269852 ACGGAGTCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGT 1269793 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||| ||||||||||| || || || || ||||| |||| ||| Sbjct 1269792 GCGACCATCTTCAAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGGAATTCC 1269733 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| ||||| || || |||||||| ||||| ||||| || | Sbjct 1269732 CTCCTTGTCCTGAATCTTCGTCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAA 1269673 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||||||||| || || |||||||| || || | ||||||| Sbjct 1269672 GGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCATT 1269630 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| || || || ||||||||||| || | || || | || || Sbjct 1269097 AGAACCAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 1269038 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| | ||| || || || ||||||| |||||||||||| Sbjct 1269037 TCCAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 1268978 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| | || ||||| | |||||| ||| Sbjct 1268977 TGGATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTC 1268918 Query 211083 TTTCCCGT 211090 || || || Sbjct 1268917 TTGCCAGT 1268910 Score = 123 bits (136), Expect = 6e-23 Identities = 150/203 (74%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || |||||||| || || |||||||| || || | | ||| | ||||| Sbjct 1269386 AGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCC 1269327 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| | || || ||||| || || | || ||||||||| Sbjct 1269326 TCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 1269267 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 || ||||| || || || ||||| || || ||| |||||||| || ||||| Sbjct 1269266 TGAATCTTGGTCTTGACATTGTCGATAGTATC---GCTCGACTCAACCTCAAGTGTGATG 1269210 Query 211080 GTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| || ||||||||||| || Sbjct 1269209 GTCTTGCCAGTGAGAGTCTTGAC 1269187 >seq99 Length=529637 Score = 127 bits (140), Expect = 5e-24 Identities = 138/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||||| |||||| || |||||||| || |||||||| Sbjct 392670 TTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGATC 392729 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| || || | |||||||| ||||||||||| || ||||| ||| Sbjct 392730 AAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 392789 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| |||||| ||||| || || ||||| ||||| || ||||| || Sbjct 392790 ATGGTGTC---GCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACG 392846 Query 211104 AA 211105 || Sbjct 392847 AA 392848 >seq44 Length=710769 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||||| || |||||||| || || | || || | || || Sbjct 242671 AGCACGAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCC 242730 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || |||||||| || | || |||||||| Sbjct 242731 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 242789 >seq330 Length=277972 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 178230 ACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCAT 178289 |||||| |||||| |||||||||| ||| |||||||| | ||||| || ||||||| Sbjct 170549 ACTTTTCGTAGAGAGCCTCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCAT 170490 Query 178290 TGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGG 178349 |||||||||| || |||| | |||| || ||||| |||||||| | ||| | | Sbjct 170489 TGGGGCAGAAAAGCGTCCAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAG 170430 Query 178350 TCCA 178353 |||| Sbjct 170429 TCCA 170426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146148455810