Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq111 161 2e-34 seq384 138 3e-27 seq99 93.3 1e-13 seq44 91.5 4e-13 >seq111 Length=1301451 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| ||||||||||| || ||||| |||||||||| |||||| || | || || Sbjct 1269623 CGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGACAGGGTA 1269564 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| ||||||||||| || ||||| || || ||||| ||||| |||||||| || Sbjct 1269563 CGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGGAATTCCC 1269504 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| || || ||||| |||||| ||||| ||||| || | ||| || || | Sbjct 1269503 TCCTTATCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCAGAAGATTCGACTTCGAGA 1269444 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| ||||| | ||| || | ||| | |||||| Sbjct 1269443 GTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCATT 1269402 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| || || ||||| || ||| || || |||| ||||| || | | ||| Sbjct 1269852 ACGGAGTCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGAGT 1269793 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||||||||| |||||||| || || || || || || ||||| || Sbjct 1269792 GCGACCATCTTCAAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGGAATTCC 1269733 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||||||| || |||||||||||| | || || || || Sbjct 1269732 CTCCTTGTCCTGAATCTTCGTCTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAA 1269673 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||||||||| || |||| ||| || | ||| | |||||| Sbjct 1269672 GGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCATT 1269630 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| || |||||||||||||| || |||| ||||| |||| ||| || Sbjct 1269396 ACGGAGACGCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGT 1269337 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || || ||||| ||||||||||| | || || |||||||| || ||||| Sbjct 1269336 GCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACC 1269277 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| ||| ||||| || || | || || || | Sbjct 1269276 CTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTATCGCTCGACTCAACCTCAAG 1269217 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || | ||| || Sbjct 1269216 TGTGATGGTCTTGCCAGTGAGAGTCTT 1269190 Score = 113 bits (124), Expect = 1e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||| ||||| || |||| || || |||| | ||| | || || Sbjct 1269097 AGAACCAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCGTCC 1269038 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || || || || || ||||| ||||||||||| Sbjct 1269037 TCCAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCC 1268978 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || || || || || ||||| ||| Sbjct 1268977 TGGATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTC 1268918 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 1268917 TTGCCAGTCA 1268908 >seq384 Length=25486 Score = 138 bits (152), Expect = 3e-27 Identities = 197/274 (72%), Gaps = 5/274 (2%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| |||||||||| | || || ||| | |||||||| ||||||| | || Sbjct 24750 ACTTTATACTTAATATTTGCTTTATTCTCAGGTTTAATAGGTACAGCATTTTCTGTTCTT 24809 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTA 7559 ||||| |||||||| ||| || ||| ||| |||||| | |||| || | || Sbjct 24810 ATAAGATTAGAATTGTCTGGACCAGGTGTACAATATATTGCA-GATAAT---CAGTTATA 24865 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| ||||| || ||||| || | ||||||||||| | |||||||| | | | Sbjct 24866 TAATAGTATAATTACTGCTCATGCTATTATAATGATTTTCTTCATGGTTATGCCAGCTTT 24925 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 ||||| ||||| || |||| || | ||| || | || || | |||||||||||| || Sbjct 24926 AATAGGAGGTTTTGGTAATTTCTTATTACCTGTATTAATAGGAGGTCCTGATATGGCATT 24985 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||| || | || ||||| ||||| |||||| || Sbjct 24986 TCCTAGATTAAATAATATTAGTTTCTGATTATTA 25019 >seq99 Length=529637 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| ||||||||||| Sbjct 392670 TTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGATC 392729 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || || ||||| || || || |||||||| || |||||||| ||| || ||| Sbjct 392730 AAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 392789 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | ||| || || | || || ||||| ||||||| || || | ||| Sbjct 392790 ATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACGAA 392848 >seq44 Length=710769 Score = 91.5 bits (100), Expect = 4e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| ||||| || || || |||| ||||| |||| | || Sbjct 242661 ACGCAGGCGCAGCACGAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGT 242720 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || ||||| ||||| || || Sbjct 242721 GCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCC 242780 Query 225612 TTCCTTGTCT 225621 ||||||||| Sbjct 242781 CTCCTTGTCT 242790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525179953436