Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq330 158 2e-33 seq210 116 5e-21 >seq330 Length=277972 Score = 158 bits (174), Expect = 2e-33 Identities = 588/912 (64%), Gaps = 16/912 (2%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || ||||||||||| | ||||| ||| ||||| ||||| ||| Sbjct 170542 GTAGAGAGCC--TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGG 170485 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 || | | | |||||| || | || ||||| ||||| || | || || |||| Sbjct 170484 CAGAAAAGCGTCCAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAA 170425 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 ||||| | || || || || | ||| ||| || ||||| || || ||||| Sbjct 170424 AGAGCGAAGAACAGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCT 170365 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | || || | || |||| ||||| || || || || || || | | | || ||||| Sbjct 170364 AAGAATTCGAAAACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGC 170305 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || || ||||| | ||||| || ||||| || | |||| | ||| |||| | Sbjct 170304 TTGTTGCCACCTTGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACA 170245 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || || || | ||||| || || | ||| || ||| | |||||||| Sbjct 170244 ATTCCATTGGAAGAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAATTCGGTGG 170185 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 ||| | || || || || || |||| || || | || ||| ||||| ||||| Sbjct 170184 ATGTTAAGGCCAATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCA 170125 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 |||||||| || |||||||| || |||| | | | ||||| | || ||| Sbjct 170124 TAGATACCTTCAATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCC 170065 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 || ||| || ||||| || | ||||| || ||||| || || |||| | ||| | Sbjct 170064 TGTGGAGTGCCGGCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATC 170005 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTG--ATGAATTCCTACCGCTACAC 78510 | | || || ||||| || ||| || | ||||| ||| ||||| || || || | Sbjct 170004 AAGTGATAGGTCTCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTC 169947 Query 78511 GCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATT 78570 ||||||||| ||||| || | ||| | ||| ||| || | || |||||| Sbjct 169946 TCATCAACATGTGCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGC 169887 Query 78571 TTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAAC 78628 || | ||||| ||||| || | ||||| ||||| || | ||||| | || | Sbjct 169886 GCTCAAGCGTTTTGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGC 169829 Query 78629 AGAATTTAGTTTATCTTTGTATTTGGTAACAATATC-CATGACAGTAGTTGAAATAATAG 78687 || || || | ||| || || | | | | || ||| | | || || || | Sbjct 169828 GGAGTTAAGCTCATCCGCGTGCTTCATGATAGTTTCATATG-TTTCATTGGATATCATCG 169770 Query 78688 GAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTAC--ATCACT 78745 | | | || | ||| || ||||||||||| | | | | ||| || || || | Sbjct 169769 GTGCTGGTTGATTATTCTTCGGATTAACATAATAATAGAGGTCTGAAATGACCAATGA-- 169712 Query 78746 AAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGC 78805 |||| | || || || | |||||| ||||| || |||||||| | || || |||||||| Sbjct 169711 AAATTGCTTCTTGGTCTGCTTGTGAAGATTGGAGACAGCTATGCGAGCTGCGAGAATAGC 169652 Query 78806 ATAATCAGGATG 78817 ||| || || || Sbjct 169651 ATAGTCTGGGTG 169640 >seq210 Length=376446 Score = 116 bits (128), Expect = 5e-21 Identities = 293/442 (66%), Gaps = 14/442 (3%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 || || || || || |||||||||||||| || || || || || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| ||||| ||||| || | || || | || | | || |||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAGA--GAAACC 39830 Query 47970 AGT---CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATA 48026 || | ||| |||||||| || ||||| ||| | | | | ||||| || | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 48027 AGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATT 48086 || ||||| ||||| || | |||||||||||||| |||| |||||| || | | Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTC----AGT 39714 Query 48087 ATCGATGTT----ACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACA 48142 | |||||| ||||| | || || || | | | || |||| || || Sbjct 39713 AATGATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCA 39654 Query 48143 TGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACC 48202 ||||| ||| || || || ||||| | | || | ||||| ||||| || ||||| Sbjct 39653 AGCAAAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACC 39594 Query 48203 GGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATAT 48262 ||||| || || || || || | ||| || || | |||||| |||||||||||||| || Sbjct 39593 TGGCATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGAT 39534 Query 48263 GCCTTCTACGGCCGCAAATGCG 48284 ||||| || |||||||| ||| Sbjct 39533 TCCTTCAACAGCCGCAAAAGCG 39512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665378756160