Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq330 150 3e-31 seq210 147 3e-30 >seq330 Length=277972 Score = 150 bits (166), Expect = 3e-31 Identities = 580/902 (64%), Gaps = 18/902 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || ||||||||||| | ||||| ||| |||||| ||||| || || | | | | Sbjct 170532 TCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCATTGGGGCAGAAAAGCGTC 170473 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | || || || ||||| || | || || |||| ||||| | || Sbjct 170472 CAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAGTCCAAAGAGCGAAGAAC 170413 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || || || | ||| ||| || ||||| || || ||||||| ||| || | | Sbjct 170412 AGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTTTTCCGGAGATCTAAGAATTCGAAA 170353 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | |||| ||||| || || || || || || | | | || ||||| || || || || Sbjct 170352 ACATCATCGTGCCAAGGCTCGAGGTAGATAGCAAAAGCGCCTGGTCGCTTGTTGCCACCT 170293 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 ||||| | ||||| |||||||| || | |||| | ||| |||| ||| || || || Sbjct 170292 TGATCCACGTATCTCGCAGTGTTGTTGAATACTCGGAGCATGGGAACAATTCCATTGGAA 170233 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||||| || || | ||| || ||| || ||||| || ||||| Sbjct 170232 GAGCCATTGGTCCCTGCAATGTAGGAACCAGTGGCGCGAATTCGGTGGATGTTAAGGCCA 170173 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || || || | ||||| ||||| || |||||||| || || Sbjct 170172 ATACCACCGGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCATAGATACCTTCA 170113 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 ||||| || || |||| | | | ||||| | || ||| || ||| || Sbjct 170112 ATACTGTCCGCCTTCATATCGACCAAGAAACACGAGGCCAACTGAGCCTGTGGAGTGCCG 170053 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| |||| || || || ||||| ||||| |||| | ||| | | | || || Sbjct 170052 GCATTGAACAGAGTCGGTGAGGCATGGGTGAAATATTTCTGAGACATCAAGTGATAGGTC 169993 Query 77060 TCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACATAT 77117 ||||| | ||| |||| ||||| ||| ||||| || || || | ||||||||| | Sbjct 169992 TCAATGGCCTTTTCGATAT--CATTGCCATGTATTCCAACGGCCACTCTCATCAACATGT 169935 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 |||| || ||||| | ||| ||| || | || |||||| || | |||| Sbjct 169934 GCTGCGGGCGTTCGGCTACCTTCCCATTGATCCGTAGCAGGTATGAGCGCTCAAGCGTTT 169875 Query 77178 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTT 77235 | ||||| || | ||||| ||||| || | ||||| | || | || || || | Sbjct 169874 TGAAACCGAAGAAATTGTAGTTGAAA--TCACGATCGTACACGATCGCGGAGTTAAGCTC 169817 Query 77236 GTCCTTATATTTGGTAACAATATC-CATG--ACAGTGGTAGAAATAATTGGAGATCGT-- 77290 ||| | || | | | | || ||| || || || || || || | | || Sbjct 169816 ATCCGCGTGCTTCATGATAGTTTCATATGTTTCATTG---GATATCATCGGTGCTGGTTG 169760 Query 77291 ATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttt 77350 ||| ||| || ||||||||||| | | | | |||| || || |||| | || Sbjct 169759 ATT--ATTCTTCGGATTAACATAATAATAGAGGTCTGAAATGACCAATGAAAATTGCTTC 169702 Query 77351 tttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGA 77410 || || | |||||| ||||| || || ||||| | ||| || ||||| |||||||| || Sbjct 169701 TTGGTCTGCTTGTGAAGATTGGAGACAGCTATGCGAGCTGCGAGAATAGCATAGTCTGGG 169642 Query 77411 TG 77412 || Sbjct 169641 TG 169640 >seq210 Length=376446 Score = 147 bits (162), Expect = 3e-30 Identities = 300/443 (68%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| || || |||||||||||||| || || || || || ||| || || || Sbjct 39946 TTCTGGTAGTCGCCAACACGTTTCTCGAAGAAGTTGGTCTTACCGGACAAGGAGATGTTG 39887 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| ||||| || || || || || || | || | | || |||| | Sbjct 39886 TCCATGAAATCGAATGGGTTGGTGGAATGGTAG-TACTTGCCGTTACCAAGA--GAAACC 39830 Query 46459 AGT---CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATG 46515 || | ||| |||||||| || |||||| ||| | | | | ||||| || | | Sbjct 39829 AGAAGACGATCAGCAACGAACTCGATATACTGGCACATGAGCTTAGAGTTCATGCCGAGG 39770 Query 46516 AGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATT 46575 || || || ||||| || | ||||||||||||||||||| |||||| || | || Sbjct 39769 AGCGCCACTGGAAGAGCATCTGACAGAAACTCTTGTTCAATAGCGACAGCCTCAGTAATG 39710 Query 46576 ATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCA 46635 || | ||| || | || || || | | | | || |||| || || ||| Sbjct 39709 ATGTTTTGTACCGTCTGCTTGCTGGGGCGGTTGTTGAGGTGAGAGAACAACAAGCAAGCA 39650 Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695 || ||| || ||||| ||||| | | || | ||||| ||||| || || || ||| Sbjct 39649 AAGTCAGTGTGGAGGCCCTCATCACGAGAGATCAGCTCGTTGGAAAAAGTAAGACCTGGC 39590 Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755 || || || ||||| || | ||| || |||| |||||| |||||||||||||| || ||| Sbjct 39589 ATCAGACCGCGCTTCTTCAACCAGAAGATAGACGCGAAGGATCCAGAAAAGAAGATTCCT 39530 Query 46756 TCTACAGCCGCGAATGCGACAAG 46778 || |||||||| || ||||| || Sbjct 39529 TCAACAGCCGCAAAAGCGACGAG 39507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930888798080