Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq111 150 4e-31 seq99 132 1e-25 seq330 84.2 5e-11 >seq111 Length=1301451 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| || || || ||||| ||||| || ||| || ||| Sbjct 1269406 CAGATTTTCGTCAAGACTCTCACGGGGAAGACTATCACTCTCGAAGTCGAATCTTCTGAC 1269465 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || || ||||| || || ||||||||| Sbjct 1269466 ACTATCGACAACGTGAAGACCAAGATTCAGGATAAGGAGGGAATTCCGCCTGACCAGCAA 1269525 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| ||||| || ||||| | || || | || || || || Sbjct 1269526 CGTCTCATTTTCGCCGGAAAGCAGCTAGAGGATGGCCGTACCCTGTCTGACTACAATATC 1269585 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || || || ||||| Sbjct 1269586 CAAAAAGAGTCCACCCTTCACCTTGT 1269611 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || ||||||||| | || || || ||||||||| Sbjct 1269634 CAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCTTGGAAGTTGAGAGCTCAGAC 1269693 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||||| || ||||| || || || ||||| Sbjct 1269694 ACCATTGACAATGTGAAGACGAAGATTCAGGACAAGGAGGGAATTCCACCTGATCAGCAG 1269753 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| |||||||| | |||||| | || || ||| || Sbjct 1269754 CGTCTCATCTTCGCAGGGAAGCAGCTTGAAGATGGTCGCACTCTTTCTGACTACAACATC 1269813 Query 178104 CAAAAAGA 178111 || || || Sbjct 1269814 CAGAAGGA 1269821 Score = 122 bits (134), Expect = 2e-22 Identities = 140/187 (75%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||| | ||||| || | ||||||||||| |||||||| Sbjct 1268910 ACTGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACCATCGATAACGTCAAGACC 1268969 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| ||||| || |||||||| ||||| || | |||||||| ||||| Sbjct 1268970 AAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGAAAG 1269029 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || || || | ||||| |||| |||||| |||| || ||||| || |||| Sbjct 1269030 CAGCTGGAGGACGGCCGCACTCTCTCCGACTATAACATCCAGAAGGAATCTACTTTGCA- 1269088 Query 178125 CTTGTTT 178131 |||| || Sbjct 1269089 CTTGGTT 1269095 Score = 116 bits (128), Expect = 9e-21 Identities = 150/203 (74%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCA 177987 |||| || |||||||| || || || ||||| || ||||| || ||| || || | Sbjct 1269185 TCGTCAAGACTCTCACTGGCAAGACCATCACACTTGAGGTTGAGTCGAGC---GATACTA 1269241 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| || ||||| |||||||||||||| || || ||||| || |||||||| || Sbjct 1269242 TCGACAATGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTT 1269301 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAA 178106 | |||||||| || || || || || ||||| | || |||| |||| || ||| |||| Sbjct 1269302 TGATCTTCGCTGGCAAGCAACTTGAGGATGGCCGCAC-CTTGTCCGACTACAACATCCAG 1269360 Query 178107 AAAGAATCAACACTGCATCTTGT 178129 || ||||| || || ||||| || Sbjct 1269361 AAGGAATCCACTCTCCATCTCGT 1269383 >seq99 Length=529637 Score = 132 bits (146), Expect = 1e-25 Identities = 140/183 (77%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 ||||||||| || || || || || || || |||||||| || ||| ||| ||||| Sbjct 392849 TTTCGTGAAGACCCTGACGGGTAAGACTATTACCCTCGATGTTGAATCGAGC---GACAC 392793 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || ||||| ||||| ||||||||||| || Sbjct 392792 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCG 392733 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 | |||||||| || || |||||||| |||||| |||| || ||| || ||| |||| Sbjct 392732 TTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGGACCCTGAGCGACTACAACATCCA 392673 Query 178106 AAA 178108 || Sbjct 392672 GAA 392670 >seq330 Length=277972 Score = 84.2 bits (92), Expect = 5e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 214265 ACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCGT 214324 ||||||| || |||| ||| ||||| ||||||||||| | ||||| || ||||| | Sbjct 170549 ACTTTTCGTAGAGAGCCTCGAATTCATCTCCGTAGACATCGGCCAGACCAGGTGCCTCAT 170490 Query 214325 TGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAAG 214384 ||||||||||||| |||| | || || | ||||| |||||||| | ||| | || Sbjct 170489 TGGGGCAGAAAAGCGTCCAGTCGCCGTTGGTCTCGACTCGCTTCATGAACAAGTCCGGAG 170430 Query 214385 TCCA 214388 |||| Sbjct 170429 TCCA 170426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725123414436