Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssochlamys_20fulva_20[genbank_20GCA_5F002242795.1_202017-08-07] 394 sequences; 29,074,643 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq44 120 3e-22 seq111 118 1e-21 seq99 111 1e-19 >seq44 Length=710769 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || ||||| || ||||||||| ||||| ||||||||| Sbjct 242656 CCACCACGCAGGCGCAGCACGAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 242715 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||| ||||| ||||||||||| ||||| | || Sbjct 242716 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGG 242775 Query 41756 ACGCTCTCCTTGTC 41769 | || ||||||||| Sbjct 242776 ATGCCCTCCTTGTC 242789 >seq111 Length=1301451 Score = 118 bits (130), Expect = 1e-21 Identities = 153/210 (73%), Gaps = 10/210 (5%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||| || |||||||| ||||||||||||||| Sbjct 1269112 CCACCACGCAGACGGAGAACCAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCGGAG 1269053 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || ||||| |||| |||||| || |||| ||| Sbjct 1269052 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGA 1268993 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | || ||||||||| ||| || ||| | | | ||| | |||||||| |||| Sbjct 1268992 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTATCGATG-----GTGTCGCTGGACT 1268938 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCA 41840 | ||||||| || || || || || |||| Sbjct 1268937 CGACCTCCAAAGTGATGGTCTTGCCAGTCA 1268908 Score = 118 bits (130), Expect = 1e-21 Identities = 161/220 (73%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| |||||||| ||||| |||||||| Sbjct 1269401 CCACCACGGAGACGCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 1269342 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || || |||||||| ||||| |||| ||||| ||||| | ||| Sbjct 1269341 AAGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGG 1269282 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | | |||||||||| ||| | || | ||| || | ||| | || ||||||||||| Sbjct 1269281 ATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATTGTCGATA--GTATCGCTCGACTCA 1269225 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||||| | || || || || || || || ||||| |||| Sbjct 1269224 ACCTCAAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 1269185 Score = 116 bits (128), Expect = 3e-21 Identities = 169/232 (73%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || |||||||||||||| ||||| ||||| || Sbjct 1269857 CCACCACGGAGTCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGAA 1269798 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| || ||||| || || ||||| || || | ||| Sbjct 1269797 AGAGTGCGACCATCTTCAAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGATCAGGTGGA 1269738 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | |||||||||| ||| | || | |||| || | | | ||||| ||| || Sbjct 1269737 ATTCCCTCCTTGTCC-TGAATCTTCGTCTTC-ACATTGTCAATGGTGTCTGAGCT---CT 1269683 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| || ||||| || || ||||| ||||| ||||| |||||||| Sbjct 1269682 CAACTTCCAAGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 1269631 Score = 105 bits (116), Expect = 6e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || |||| || || || || ||| ||| || || || || ||||| || Sbjct 1269629 CCACCGCGAAGTCGTAGGACAAGGTGAAGGGTGGACTCTTTTTGGATATTGTAGTCAGAC 1269570 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| |||||||| || || || || ||||| | ||| Sbjct 1269569 AGGGTACGGCCATCCTCTAGCTGCTTTCCGGCGAAAATGAGACGTTGCTGGTCAGGCGGA 1269510 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||| ||| ||| | || | ||||| || | | | |||||| || || | Sbjct 1269509 ATTCCCTCCTTATCC-TGAATCTTGGTCTTCA-CGTTGTCGATAGTGTCAGAAGATTCGA 1269452 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || || || ||||| || ||||| |||||||||||||| Sbjct 1269451 CTTCGAGAGTGATAGTCTTCCCCGTGAGAGTCTTGACGAAAATCTGCAT 1269403 >seq99 Length=529637 Score = 111 bits (122), Expect = 1e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| ||||| || | || ||||||||||| || ||||| | Sbjct 392668 CCTTCTGGATGTTGTAGTCGCTCAGGGTCCGTCCATCCTCGAGCTGCTTACCAGCGAAGA 392727 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 ||| ||||| ||||||| ||| | || ||||| ||| ||| || ||| ||| | Sbjct 392728 TCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGTCTT-GACGTTG 392786 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||||||||| || || || | || || || ||||||||||| ||||| ||| Sbjct 392787 TCGATGGTGTCGCTCGATTCAACATCGAGGGTAATAGTCTTACCCGTCAGGGTCTTCACG 392846 Query 41852 AAA 41854 ||| Sbjct 392847 AAA 392849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301723152800