Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2228 120 3e-22 >seq2228 Length=283306 Score = 120 bits (132), Expect = 3e-22 Identities = 199/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| ||||| ||||| | ||| | |||||||| ||||||||||| ||||| Sbjct 201273 ATATATGTATCAATGAGCAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 201214 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || |||||||| || || || || ||| Sbjct 201213 AAACCGTAGAAGCAACGGGCCTCTGGAATCTGAACTTCGCCGCTAAAGCGCTCAAGAAGA 201154 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA- 17412 |||||||| |||||||||||| ||||| || || ||||| | ||| ||||| || Sbjct 201153 TTTTCGTTGACGATGCCGTCGGAAGCGGCAAAGAAGGCCAACACATGAGAGATGAAGTAG 201094 Query 17413 --TTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || ||||| | || | |||||| | | |||||||| | ||| | ||| Sbjct 201093 CGTTCATCGTCATTTAGTCGATCATTCCAGTCGTGAAGGTCTTTGGACAAATCGATCTCT 201034 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| |||||| || ||| | ||||| || ||||| | ||| || Sbjct 201033 TCGGCGGTCCAGAAGGACGCCTCGGCCTTCTTGTACATCTGCCAGAT 200987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517514217328680