Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3060 120 5e-22 >seq3060 Length=205498 Score = 120 bits (132), Expect = 5e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | |||||| |||| ||||| ||||| || | ||| | || | Sbjct 122882 ATGCAAATTTTTGTTAAGACATTAACCGGCAAGACTATTACATTGGAGGTCGAGTCGTCA 122941 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || || |||| || |||||||||||||||||||||||| ||||| || || Sbjct 122942 GACACGATCGACAACGTTAAGAC-GAAAATTCAAGATAAAGAAGGTATCCCACCCGACCA 123000 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| ||||| || | |||||| |||| ||| | |||||||| Sbjct 123001 ACAGCGACTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACACTCTCCGATTATAA 123060 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 || || || ||| ||| |||||||||| || Sbjct 123061 CATCCAGAAGGAAAGCACTCTGCATTTGGTATT 123093 Score = 104 bits (114), Expect = 4e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 ||||| || || || || ||||| ||| | ||| ||||| | ||||| || ||| Sbjct 122441 AAGACTCTCACGGGAAAGACTATCACTCTCGAGGTTGAATCCTCCGATACCATCGATAAC 122500 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | ||| || ||||| ||||| || || || || || ||||| ||| | | ||||| Sbjct 122501 GTGAAAACCAAGATTCAGGATAAGGAGGGCATCCCTCCAGATCAGCAACGCTTGATTTTC 122560 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || || |||||| | |||||| |||| || | |||||||| || ||||| ||||| Sbjct 122561 GCTGGCAAACAACTTGAGGATGGTCGCACTCTCTCTGATTATAACATCCAAAAGGAATCT 122620 Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| | ||| | || | ||| | ||||||||||| Sbjct 122621 ACTCTCCATCTTGTCCTCCGTCTCCGAGGTGGTAT 122655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755410191036800