Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3060 118 1e-21 seq4836 107 2e-18 >seq3060 Length=205498 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||| |||||||||| ||||| ||||| || || || ||||| | || ||||| | || Sbjct 123094 CAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACCATC 123035 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||| ||||| || ||||||||||| ||||||| || | | || ||| Sbjct 123034 CTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATAC-CTTCTTTAT 122976 Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| |||| || | | ||| | | | |||||| ||| || || || | || || | Sbjct 122975 CTTGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAATAG 122916 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| |||| ||||| ||||| |||||||| Sbjct 122915 TCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882 >seq4836 Length=199183 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 ||||||| ||||||||||| || ||| || |||| || |||||||| |||||||| | Sbjct 162949 CCTTTTGGATATTGTAATCGCTCAAAGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAAA 162890 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | ||||||||||| | || | || ||||||||| |||||| || | | Sbjct 162889 TCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTTGCTCTTCACATTGT 162830 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | ||||||||| || ||||| || | ||||| || ||||| || || ||||| || | Sbjct 162829 CGATCGTGTCGCTGGACTCCACTTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 162770 Query 43174 AG 43175 || Sbjct 162769 AG 162768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571782926410280