Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3060 118 8e-22 >seq3060 Length=205498 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| || | |||||| |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 123109 GCCGCCGCGCAATCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGA 123050 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| ||| | || || || || ||||| || || || | |||||||||||||| || Sbjct 123049 GAGTGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGG 122990 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||| || || || |||||| |||||| | | |||| ||| || Sbjct 122989 GATACCTTCTTTATCTTGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGAC 122930 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||||| |||||||| || | ||||| ||||| |||||||| Sbjct 122929 CTCCAATGTAATAGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||| |||||||| || || || | || || Sbjct 122342 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCA 122283 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| ||||| || || ||||| ||||| | ||||||||||| Sbjct 122282 AGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTGG 122223 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | || || ||| ||||| | ||| || |||||| Sbjct 122222 ATCTTTGTCTTCACATTGTCGATAGTATCACCGGACTCAACCTCAAGGGTGATGGTCTTG 122163 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||| ||||| || ||||| Sbjct 122162 CCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 ||||| || ||| ||||||||||||||||| || |||| |||| || || ||| Sbjct 122856 TGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGT 122797 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || ||||| || ||||| ||||| ||||| || || | ||||||||||| ||| || Sbjct 122796 TTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAATCTTA 122737 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 || || | | |||| | ||| || || | || || || || || ||| Sbjct 122736 GTTTTGACGTTGTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTTCCGGTC 122677 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||||||||| || ||||| Sbjct 122676 AAGGTCTTCACAAAAATCTGCAT 122654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395051842536871