Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2228 118 2e-21 seq3934 109 1e-18 >seq2228 Length=283306 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || |||||||| |||||||| ||||| | ||||| || ||||||||| Sbjct 201464 GTTGCCTTTGCAGCCGTTGAAGGTATCTTCTTCAGTGGCTCTTTCGCTTCTATTTTCTGG 201523 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | || || |||| |||||||| | || ||||| || ||||| | ||| Sbjct 201524 TTGAAGAAACGTGGCCTTATGCCCGGTCTCACTTTTTCGAATGAATTGATTTCCCGTGAC 201583 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || ||||||||| ||| | || || Sbjct 201584 GAGGGTCTCCACACCGACTTTGCCTGCCTCCTCTT 201618 >seq3934 Length=413549 Score = 109 bits (120), Expect = 1e-18 Identities = 177/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || ||||| |||||||| || | || ||| |||||||| || ||||| Sbjct 409102 CCGATACCGCCAGCTGTCTTGGAAATCAGAGCGCAGGTCTTTAGAGTATCGTAGATACCA 409161 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || |||||||| || | | | | || || || |||| | || ||| |||| Sbjct 409162 TCGATGCTATCTTCCTTCATATCAATGAGAAAACAGGAGGCCATCTGTGGTTGCGGTGTT 409221 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || || || || |||||||||||||| |||||||| | | ||||| |||| ||| Sbjct 409222 CCCGCGTTGAAAAGAGTGGGGGAAGCATGTGTAAAATATTTCTGAGACATCAGATTATAC 409281 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 ||||| || | | |||||| || |||||||| || || ||||||||||||||| Sbjct 409282 GTTTCGATCGCCTTCTCAATGTCTTCGCCATGAATGCCAACCGCAACACGCATAATCATG 409341 Query 95026 TCCTGAGGGCGCTCA 95040 | || || |||||| Sbjct 409342 TGTTGCGGACGCTCA 409356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989522493952705