Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3934 201 1e-46
seq2228 104 3e-17
>seq3934
Length=413549
Score = 201 bits (222), Expect = 1e-46
Identities = 563/856 (66%), Gaps = 16/856 (2%)
Strand=Plus/Plus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
||||| | ||| | ||| || |||| | || || || ||||| || ||||| || ||
Sbjct 408790 GGACAAAACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCGGGGGTC 408849
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA--- 66143
|||||||| | || | ||| | || ||| |||||| ||||| | ||||||
Sbjct 408850 CAAAGAGCAAGGAAGAGATCACGGGCTCTTACTTCCTCCTTTCCG---TGGTTTTTACGG 408906
Query 66144 AGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 66203
||||| | ||| | | ||||| | ||||| ||||| | || ||||| | | |||
Sbjct 408907 AGATCTAAAAACTCGAAGATATCGGAGTGCCAAGGTTCAAGATAAATGGCAAAGGCGCCA 408966
Query 66204 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 66263
||||||||||| || || || || | |||| ||| || || ||| | || | | |||
Sbjct 408967 GGCCGTTTGTTGCCACCTTGGTCGACATATCGAGCTGTATTGTTAAAGACACGGAGCATG 409026
Query 66264 GGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATA 66323
|| | || || || || | || || || || | || ||| ||| | || ||||||
Sbjct 409027 GGGACGATTCCGTTAGAGGAGCCGTTTGTTCCTGCAATGTAGGAGCCAGTCGCGCGAATA 409086
Query 66324 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 66383
| || ||||| || || || || | || || || | ||||| ||||
Sbjct 409087 CGATGGATATTAAGACCGATACCGCCAGCTGTCTTGGAAATCAGAGCGCAGGTCTTTAGA 409146
Query 66384 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 66443
||||| ||||| || || || ||||| ||| |||| | || ||||||||| | |||
Sbjct 409147 GTATCGTAGATACCATCGATGCTATCTTCCTTCATATCAATGAGAAAACAGGAGGCCATC 409206
Query 66444 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503
|| | | |||||||| || || | || || ||||| || ||||| |||| | |
Sbjct 409207 TGTGGTTGCGGTGTTCCCGCGTTGAAAAGAGTGGGGGAAGCATGTGTAAAATATTTCTGA 409266
Query 66504 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 66563
|| | ||||| ||||| || || || || || || |||||| || || ||
Sbjct 409267 GACATCAGATTATACGTTTCGATCGCCTTCTCAATGTCTTCGCCATGAATGCCAACCGCA 409326
Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 66623
|||||||| | |||||| || || | ||| ||| |||| || ||| ||||| ||
Sbjct 409327 ACACGCATAATCATGTGTTGCGGACGCTCAGCGACCTTGCCATTGATTCGCAACAGATAT 409386
Query 66624 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAA 66681
|| | || |||||||| || || ||||| | || ||||| || || || |||| ||
Sbjct 409387 GACCTCTCTAAAGTTTTGAATCCGAAATACTGATAGTTGAAA--TCACGATCATAAACAA 409444
Query 66682 TAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT-GGTAATACTTGAAATA 66740
| |||| || |||| || || || |||| | ||| | ||| | |||||
Sbjct 409445 TGGCCGAATTAAGTTCCTCGGCATGCTTCATAAC-AATTCCGTAGGTTTTTTGAGAAATC 409503
Query 66741 ATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAA--TCCTCCATCACTT 66798
|| || | | || |||||| || || | |||| ||||| || || || ||
Sbjct 409504 ATAGGCGCAGGTCGGTTATTTTTCGGGTTAATGTAGT--GATAAAGGTCGTCAATGACCG 409561
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
| || ||||||| || | |||||||| || || ||||||||||| || || | |
Sbjct 409562 AAGAGAACTGTTTTTTGGTCTGCTTGTGTAGGTTGGACACGGCTATTCTGGCTGCAAGGA 409621
Query 66859 TGGCATAATCCGGATG 66874
| ||||| || || ||
Sbjct 409622 TAGCATAGTCTGGGTG 409637
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|||||||| |||||||| || || | | ||||| ||||||||||| || || || ||
Sbjct 407541 GTGAATTGGATGGGAGCTGAAGCTGCCATTGTACGGAGATAGTACATCCCAGTCTTCAGG 407600
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | ||||||| ||||||||| || || | |||| | || ||| | |
Sbjct 407601 CCCAACTTCCATCCCGCAAAATGCATGCTGGTGATTTTGCCCATTGTAGGCTCTTTGAGA 407660
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
||||| || | ||||||| |||||||||||| || |||| ||| |||||||| | |||
Sbjct 407661 TGGATGTTGAGAGATTGAGATTGATCGATGAATGCGCCCCGGTCAGCAGCCATCTGAATG 407720
Query 65019 ATCGTCTTTTGTGGAATTTCCCA 65041
|| ||| |||| | ||||||||
Sbjct 407721 ATGGTCCTTTGGGAGATTTCCCA 407743
>seq2228
Length=283306
Score = 104 bits (114), Expect = 3e-17
Identities = 294/452 (65%), Gaps = 0/452 (0%)
Strand=Plus/Minus
Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910
|| ||| || ||| || ||||| ||||| || || || ||||| || || || || ||
Sbjct 201916 AGCCATCACACCCGCCTTCTGGTAATCACCAACCCGCTTCTCGAAGAAGTTGGTCTTGCC 201857
Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAA 35970
| || || || || ||||| || || ||||| ||| | |||| || | |||||
Sbjct 201856 GGCCAACGAGATGTTATCCATAAAGTCAAATGGGTTGGTGGCATTGTAGAACTTTTTGTT 201797
Query 35971 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 36030
||||| || || || ||| || || ||||| || |||||| ||| | |
Sbjct 201796 GCCCAAAGCAACAAGCAGTCTGTCGGCAACAAACTCGATATATTGGCACATGAGCTTGGC 201737
Query 36031 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 36090
||||| || | ||| | ||||||||| |||| | ||||| | ||||| ||
Sbjct 201736 GTTCATGCCAAGAAGGGCACATGGAAGAGCATCAGTTAAGAATTCCTTCTCAATCTCAAC 201677
Query 36091 CGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 36150
|| ||||| || || | || | | || ||| | || ||
Sbjct 201676 TGCCTCTGTGATGATGGCCTCAACGGCCGAAGGGCCGGGGCGATGGCGGAGGTGGGAGAA 201617
Query 36151 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 36210
| | || || || ||| ||| ||||||||||| | ||| ||||| || |||||
Sbjct 201616 GAGGAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAAATCAATTCATTCGAAAA 201557
Query 36211 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 36270
||||| |||||||| |||||||| || || | ||| || || || || || || |||
Sbjct 201556 AGTGAGACCGGGCATAAGGCCACGTTTCTTCAACCAGAAAATAGAAGCGAAAGAGCCACT 201497
Query 36271 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 36302
||||| || ||||| || || ||||||||||
Sbjct 201496 GAAGAAGATACCTTCAACGGCTGCAAAGGCAA 201465
Score = 84.2 bits (92), Expect = 3e-11
Identities = 197/295 (67%), Gaps = 7/295 (2%)
Strand=Plus/Minus
Query 36419 TCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGG 36476
|| || | |||||||||||| | ||||| || | || || || ||||| || ||
Sbjct 201279 TCCTTGATATATGTATCAATGAGCAAAGA--GTAGGTCTCGGAGTGGATGTTCTCCATCA 201222
Query 36477 CCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTT 36536
|| || || |||||||| || | ||||| | |||||| ||||| | ||| || |
Sbjct 201221 TGATCTGGAAACCGTAGAAGCAACGGGCCTCTGGAATCTGAACTTCGCCGCTAAAGCGCT 201162
Query 36537 CTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 36596
| | |||||| || || || ||||| || ||||| || ||||| ||||| |
Sbjct 201161 CAAGAAGATTTTCGTTGACGATGCCGTCGGAAGCGGCAAAGAAGGCCAACACATGAGAGA 201102
Query 36597 TAAAATA---TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATAT 36653
| || || || |||| | | | | |||||| || | | ||||| || | ||
Sbjct 201101 TGAAGTAGCGTTCATCGTCATTTAGTCGATCATTCCAGTCGTGAAGGTCTTTGGACAAAT 201042
Query 36654 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708
| | ||||| | ||||| || || ||||| ||||| || ||||| | ||||||
Sbjct 201041 CGATCTCTTCGGCGGTCCAGAAGGACGCCTCGGCCTTCTTGTACATCTGCCAGAT 200987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658132890046840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |